Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 553–576 of 2565 models
Voice biomarker model that flags current type 2 diabetes from one 20-second speech recording, validated against HbA1c blood tests in 801 adults.
Protein language model that classifies RNA-binding proteins, localizes RNA-binding domains, and scores mutation effects at single-residue resolution.
Single-nucleotide-resolution RNA foundation model pretrained on non-coding RNAs with ELECTRA-style replaced-token detection for regulatory inference.
Virtual cell foundation model predicting single-cell responses to genetic, chemical, and cytokine perturbations with conditional flow matching.
Protein backbone design model pairing flow matching with a Mamba state-space backbone, generating long proteins in linear time with exact geometry.
Diffusion language model with 4.9 billion parameters that predicts genome-wide CRISPRi perturbation responses in single-cell transcriptomes.
Dual-encoder contrastive model that retrieves enzymes for query reactions by matching reaction fingerprints to protein sequence embeddings.
Predicts protein complex stoichiometry from amino acid sequence alone, ranking copy numbers in seconds and exporting AlphaFold3-ready JSON files.
Geometric deep learning model that learns atomic-scale representations of molecular interfaces across proteins, small molecules, and nucleic acids.
Brain MRI synthesis in 3D across T1w, T2w, FLAIR and SWI, whole-brain or skull-stripped, at up to 512x512x256 voxels in 30 sampling steps.
Multimodal foundation model integrating spatial transcriptomics, H&E histopathology, and pathway scores for single-cell niche discovery.
Transformer that generates multi-species antibody and nanobody framework regions at the mRNA level, conditioned on input CDRs, across six species.
Sequence-to-ensemble predictor that generates conformational ensembles of intrinsically disordered proteins zero-shot, with no per-sequence refitting.
Flow-matching generative model for de novo atomistic protein binder design against protein and small-molecule targets, including carbohydrate binders.
All-atom generative foundation model that designs small molecules, peptides, and nanobodies against a target binding site from a single checkpoint.
Generative virtual-cell model predicting whole-transcriptome responses to unseen compounds and genetic perturbations, from cell lines to organoids.
Virtual staining model that generates four IHC markers, HER2, Ki67, ER, and PR, from H&E using a generator conditioned on a frozen UNI encoder.
Molecular reasoning model built on DeepSeek-7B, using chain-of-thought and reinforcement learning for property prediction, generation, and reactions.
Coding-sequence foundation model for mRNA design, pretrained as a BART denoising encoder-decoder on mRNA from nine taxonomic groups.
Vision transformer trained with DINO self-supervision to segment micronuclei in DNA-stained fluorescence images across cell lines and microscopes.
DNA language model that replaces fixed tokenization with conservation-guided patching, letting models up to 10x smaller match top genomic benchmarks.
Cell-centric microscopy foundation model that distills morphology and microenvironment views into a unified embedding for virtual spatial omics.
Hierarchical language model for atlas-level cell-type annotation of scATAC-seq data that annotates new query datasets without retraining.