Labs & Groups (2)
Models (6)
SubCell
Chan Zuckerberg Initiative / Human Protein Atlas / Lundberg Lab
Self-supervised Vision Transformer models trained on proteome-wide fluorescence microscopy images from the Human Protein Atlas for subcellular protein localization.
CryoViT
Stanford University
Semi-supervised cryo-ET segmentation framework that adapts DINOv2 vision transformers for 3D organelle annotation using sparse 2D slice labels.
UCE
Stanford University
Zero-shot foundation model for single-cell gene expression that generates species-agnostic cell embeddings using protein language model representations of gene products.
PLIP
Stanford University
CLIP-based vision-language foundation model for pathology, fine-tuned on 208,414 image-text pairs. Enables zero-shot tissue classification and image retrieval.
HyenaDNA
HazyResearch
Genomic foundation model using the Hyena operator to process DNA at single-nucleotide resolution with context lengths up to 1 million tokens, 500x longer than transformer-based predecessors.
Efficient Evolution of Human Antibodies from Protein Language Models
Stanford University
Zero-shot antibody affinity maturation using ESM pseudolikelihood scoring. Improves binding up to 160-fold with no antigen-specific training data.