All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 577–600 of 943 models
Tahoe-100M-SCVI
1.7K4—scVI variational autoencoder trained on the Tahoe-100M drug-perturbation atlas, giving a 10-dimensional embedding of treated cancer cell states.
Single-cell93OpennessRIME
———RNA-RNA interaction prediction framework that scores pairing between long transcripts directly from sequence using Nucleotide Transformer embeddings.
RNA14OpennessHeartLang
563—ECG foundation model that treats heartbeats as words and rhythm strips as sentences, using heartbeat-level tokenization for diagnostic classification.
Biosignals78OpennessHealthGPT
1.6K3425Zhejiang University +4 othersFebruary 14, 2025histologyimage_reconstructionmedical_image_generation+7Medical vision-language model that unifies image comprehension and generation in one autoregressive transformer via heterogeneous LoRA adapters.
PathologyImaging68OpennessNatureLM
—3218Unified science foundation model treating molecules, proteins, RNA, DNA, and materials as one sequence language, in 1B, 8B, and 46.7B sizes.
Language modelSmall moleculeProtein27Openness- Rensselaer Polytechnic Institute +2 othersFebruary 11, 2025chest_ctdisease_classificationfoundation_model+7
865M-parameter multimodal foundation model that fuses 3D low-dose chest CT with clinical data to answer 17 lung cancer screening questions.
Imaging71Openness Functional MRI foundation model that learns brain dynamics as a stochastic optimal control problem, self-supervised on 41,072 UK Biobank subjects.
Biosignals8OpennessM3FM
191.4K—Multimodal medical imaging foundation model for zero-shot clinical diagnosis and report generation from chest X-ray and CT in English and Chinese.
ImagingLanguage model60OpennessGenomeOcean
150242.2K4B-parameter generative genome foundation model trained on assembled environmental metagenomes for microbial representation and de novo DNA design.
DNA & Gene49OpennessECG-LM
—42—Multimodal ECG language model pairing a specialized signal encoder with a biomedical LLM for cardiovascular disease detection and question answering.
BiosignalsLanguage model24OpennessFM-CT
6213—Self-supervised 3D vision foundation model for non-contrast head CT, pretrained on 361,663 scans to detect a broad range of intracranial disease.
Imaging26OpennessPulse-PPG
7282—Photoplethysmography foundation model pretrained on raw wearable signals from a field study, transferring across lab and field health tasks.
Biosignals64OpennessCryo-ET particle picking model that averages tiny, medium, and large 3D U-Nets pretrained on simulated tomograms and fine-tuned on experimental data.
Imaging86OpennessCellpose 3
2.3K377—Generalist cell segmentation pairing the cyto3 super-generalist model with one-click networks that denoise, deblur, and upsample microscopy images.
Imaging65OpennessMonjuDetectHM
211—Cryo-ET particle picking ensemble of three 3D segmentation models predicting particle-center heatmaps with ResNet50d and EfficientNetV2-M backbones.
Imaging95OpennessTopCUP
3——Cryo-ET particle picking model, an ensemble of 3D U-Nets with EfficientNet encoders that finds protein complexes in tomograms by heatmap segmentation.
Imaging96OpennessBPD
2——Cryo-ET particle picking model that localizes six protein complexes in tomograms using an ensemble of lightweight 3D U-Nets.
Imaging67OpennessMINIM
15850—Text-to-image diffusion model that generates synthetic medical images across imaging modalities and organs to augment scarce clinical training data.
Imaging41OpennessSNPBag
159—Genomics foundation model for genome-scale SNP analysis, handling imputation, phasing, ancestry, and relatedness from one 0.8B-parameter checkpoint.
DNA & Gene29OpennessTrASPr
—13—Multi-transformer model that predicts tissue-specific alternative splicing outcomes and generalizes zero-shot to unseen cellular conditions.
RNA33OpennessEndoChat
514417Chinese University of Hong Kong +5 othersJanuary 20, 2025endoscopygrounded_dialogueinstruction_tuning+6Grounded multimodal language model for endoscopic surgery, supporting visual dialogue, region-based question answering, and bounding-box grounding.
ImagingLanguage model22OpennessMedicoSAM
3150—Segment Anything Model finetuned on diverse medical images, giving a reusable promptable checkpoint for interactive and automatic image segmentation.
Imaging77OpennessProtenix
2K123—Open-source PyTorch reproduction of AlphaFold 3 under Apache 2.0, matching or exceeding AF3 on protein-ligand, protein-protein, and RNA benchmarks.
Protein76OpennessBrainfound
—4—Tsinghua University +2 othersJanuary 10, 2025contrastive_learningcross_modality_translationdiffusion+9Multimodal vision-text foundation model for brain CT and MRI, pretrained on roughly 10 million image-report pairs to act as a clinical copilot.
ImagingLanguage model7Openness