All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 121125 of 125 filtered models

  • tGPT

    1762159
    Tianjin Medical University Cancer Institute and HospitalApril 20, 2023cell_type_annotationfoundation_modellanguage_model+4

    Single-cell foundation model pre-trained on 22 million transcriptomes, using rank-based gene encoding for clustering and trajectory inference.

    Single-cell
    50Openness
  • scMoFormer

    2720
    Michigan State UniversityJanuary 1, 2023foundation_modelmulti_omicstransformer

    Transformer framework for single-cell multi-omics that predicts cross-modality relationships using heterogeneous graphs of cells, genes, and proteins.

    Single-cellProtein
    59Openness
  • scBERT

    359622
    Tencent AI LabSeptember 1, 2022cell_type_annotationfoundation_model

    Pretrained transformer for cell type annotation of scRNA-seq data. Trained on 1.1M cells; outperforms supervised methods on cross-dataset transfer.

    Single-cell
    46Openness
  • CPA

    149321
    Theis LabApril 15, 2021autoencoderdrug_response_modelinggenerative+5

    Single-cell perturbation prediction model that forecasts transcriptional responses to drug combinations and doses never experimentally measured.

    Single-cell
    78Openness
  • DCell

    125393
    Ideker LabJanuary 1, 2018interpretablesystems_biology

    Visible neural network simulating eukaryotic cell growth by embedding the Gene Ontology into its architecture for interpretable phenotype prediction.

    Single-cell
    41Openness