Academic

Westlake University

Chinese research university focused on science and technology

Location: Hangzhou, China
9 models(4 Protein, 2 Single-cell, 2 Imaging, 2 Language model, 1 Small molecule, 1 Pathology)

Models (9)

scDFM

Westlake University

Released February 6, 2026

539

Distributional flow matching model for single-cell perturbation prediction that models population-level expression shifts using a graph-aware differential-attention transformer.

Single-cell

GEMGen

Westlake University / Microsoft Research Asia

Released January 3, 2026

1

A language model that generates small-molecule structures directly from transcriptomic phenotypes — gene up/down-regulation signatures — for phenotype-driven drug discovery.

Small moleculeSingle-cell

Pinal

Westlake University

Released April 2, 2025

291394

A 16B-parameter framework for de novo protein design from natural language, converting text descriptions into functional protein sequences via two-stage structure-conditioned generation.

Protein

M3FM

University of Oxford / GSK.ai / Amazon Web Services / University of Rochester / Tencent AI Lab / Shanghai Jiao Tong University / Westlake University

Released February 6, 2025

3619

Multimodal, multidomain, multilingual medical foundation model that performs zero-shot clinical diagnosis and report generation from chest X-ray and CT images across English and Chinese.

ImagingLanguage model

Evolla

Westlake University

Released January 6, 2025

22769

An 80B-parameter multimodal protein-language model that decodes protein function through natural language dialogue, integrating sequence, structure, and evolutionary context.

Protein

Cryo-IEF

Westlake University

Released November 6, 2024

69

Foundation model pre-trained on 65M cryo-EM particle images via contrastive learning, enabling zero-shot classification, pose clustering, and quality assessment.

Imaging

ProTrek

Westlake University

Released June 1, 2024

1569208

Tri-modal protein language model unifying sequence, structure, and function via contrastive learning, enabling natural-language protein search across billions of entries.

Protein

SaProt

Westlake University

Released October 1, 2023

3153K605

Protein language model combining amino acid and Foldseek 3Di structural tokens, outperforming ESM-2 across 10 downstream tasks including mutation effect prediction.

Protein

PathAsst

Westlake University / Zhejiang University / The Ohio State University / Hangzhou City University

Released May 24, 2023

95133

A multimodal generative AI assistant for pathology, pairing the PathCLIP vision encoder with a Vicuna-13B LLM and a toolkit of eight pathology-specific models.

PathologyLanguage model