Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 1849–1872 of 2336 models
Multi-modal protein foundation model aligning 3D structure and literature text to a sequence anchor through contrastive pretraining.
Diffusion model for de novo protein backbone design that learns a 32-dimensional latent code for global fold geometry and generates conditioned on it.
Multimodal LLM for inverse molecular design, interleaving text and graph generation with a diffusion transformer and A* retrosynthetic planning.
Convolutional ECG foundation model trained on expert annotations spanning 150 diagnostic categories, with 12-lead and single-lead wearable variants.
Protein sequence embedding method that pools a language model's token outputs by PageRank over its own attention, adding no trained parameters.
Protein conformational ensemble generation guided by experimental observables, steering a pretrained diffusion sampler toward Boltzmann statistics.
Perturbation target identification for single-cell transcriptomics, reading intervened genes off the difference between two inferred causal graphs.
Pharmacophore-conditioned generator that emits molecules as synthetic trees of Enamine building blocks, so every design carries a synthesis route.
Immunogenicity classifier for reverse vaccinology, fusing frozen protein language model embeddings with Foldseek and ESM3 structure tokens.
ECG foundation model pretrained on 12-lead waveforms paired with clinical reports, enabling label-efficient and zero-shot cardiac diagnosis.
Cis-regulatory element classifier that reads DNA sequence plus chromatin accessibility and loop tracks to label enhancers, silencers and insulators.
RNA language model that predicts G-quadruplex formation and subtype from transcript sequence and scores how single-nucleotide variants alter folding.
Chemical language model that tokenizes each atom by its functional group, giving transferable embeddings for molecular property prediction.
Gene expression prediction across a megabase of DNA that aligns frozen regulatory sequence features to language-model tokens by cross-attention.
Cardiac MR vision foundation model self-supervised on 36 million images, fine-tuned for segmentation, view classification and pathology detection.
Antibody language model that reads sequence and backbone coordinates together, so a masked CDR can be recovered from either or both modalities.
Joint-embedding predictive foundation model pretrained on over a million unlabeled ECGs, learning transferable 12-lead representations for diagnosis.
Transformer-based generative language model for de novo RNA design, pretrained on 16 million non-coding RNA sequences from RNAcentral.
Generative DNA language model for plasmid design and annotation, pretrained on 153,208 engineered plasmid sequences deposited in Addgene.
Enzyme catalytic pocket design conditioned on a reaction: substrate and product in, pocket backbone, sequence, and EC class out.