Academic

University of California, San Diego

A public research university in La Jolla, California, pairing bioengineering and computational genomics with a large academic health system.

Location: La Jolla, USA
Website
6 models(3 Imaging, 1 Single-cell, 1 Language model, 1 Protein, 1 Biosignals)

Models (6)

ScaleSurfer

University of California, San Diego

Released July 1, 2026

8

Brain MRI morphometry model that estimates cortical thickness, surface area, and volume in milliseconds instead of hours.

Imaging

HyperMap

University of California, San Diego / Ideker Lab

Released April 27, 2026

1

Meta-learning framework that transfers perturbation responses across cell lines, donors, and drugs from a few measured seed perturbations.

Single-cell

NeuroVLM

University of California, San Diego

Released February 9, 2026

8

Vision-language foundation model linking human brain activation maps and neuroscience text for text-to-brain and brain-to-text generation.

ImagingLanguage model

FoldMatch

RCSB Protein Data Bank / University of California, San Diego

Released March 6, 2025

11

Protein structure embedding model that compresses each 3D fold into a single fixed-length vector for proteome-wide similarity search and clustering.

Protein

NormWear

University of California, San Diego

Released December 12, 2024

3111659

Multimodal foundation model for wearable physiological sensing across PPG, ECG, EEG, GSR, and IMU signals, using channel-aware attention.

Biosignals

LVM-Med

University of Stuttgart / German Research Center for Artificial Intelligence (DFKI) / Max Planck Institute for Informatics / University of Texas at Austin / University of Bonn / University of California, San Diego / National University of Singapore

Released June 20, 2023

100217

Self-supervised vision foundation model pretrained on 1.3M medical images via second-order graph matching, for segmentation and classification.

Imaging