Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 1945–1968 of 2336 models
Open medical multimodal LLMs (7B and 34B) for visual question answering over radiology, pathology, and endoscopy images, trained on PubMedVision.
Self-supervised foundation model for 12-lead ECG, pairing masked autoencoder pretraining with contrastive regularization for robust diagnostics.
Multimodal generative protein language model reasoning jointly over protein sequence, structure, and function, trained at 98B parameters.
Self-supervised masked autoencoder for functional MRI that learns representations from BOLD time-series with per-ROI embeddings and graph attention.
DeepLabV3 segmentation model that separates tissue from glass background in H&E and IHC whole-slide images, as used by the HEST-Library.
Respiratory acoustic foundation models pretrained on roughly 136K cough and breathing recordings for disease detection and lung function estimation.
Blind peptide binder design from a protein sequence alone, evolving linear or cyclic binders against a frozen AlphaFold2 with no binding site given.
3D vision-transformer foundation model for multimodal neuroimage segmentation, pretrained self-supervised on brain MRI from 41,400 participants.
Fluorescence microscopy denoising for transient synaptic signals, done frame by frame so one checkpoint transfers across sensors and frame rates.
Scaling-law study of protein language models identifying compute-optimal training for causal and masked objectives on 939 million protein sequences.
Single-cell foundation model with 800M parameters trained on ~100 million human cells, for annotation, perturbation prediction, and gene analysis.
Single-cell transcriptomics foundation model with 100 million parameters, pretrained on over 50 million human scRNA-seq profiles for cell embeddings.
Microsoft Research multimodal LLM for grounded chest X-ray report generation, localizing each described finding with bounding boxes on the image.
Structure-based molecular design that samples a quantum electron cloud in the protein pocket, then decodes it into ligands with a Llama-style model.
Multi-task protein framework recasting function, binding site, and structure prediction as autoregressive next-token prediction over ESM2 embeddings.
Virtual staining models that translate label-free light microscopy into fluorescent-equivalent predictions of nuclei and plasma membranes.
Discrete diffusion model that generates RNA secondary structure contact maps as pixel-wise segmentation, conditioned on RNA-FM and UFold features.
Full-atom peptide binder design against a target pocket, generating backbone frames, side-chain torsions and residue types in one joint flow.
Protein function prediction model that conditions a T5 encoder-decoder on retrieved homologs to assign EC numbers, GO terms and Pfam families.
Neural ab initio reconstruction for cryo-EM and cryo-ET that jointly infers particle poses and a continuous landscape of conformational states.