Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 1–24 of 27 filtered models
Histopathology tile encoders reach 22M parameters by distilling billion-parameter teachers through their frozen class and patch tokens alone.
Open-weights pathology foundation models pairing a 1.1B-parameter ViT-g/8 tile encoder with distilled 86M and 22M variants for H&E histology.
Medical language model compressed to ternary weights, running a 27B-class clinical and biomedical assistant offline from a single 8.48 GB file.
Breast cancer histopathology foundation model distilled from three general-purpose PFMs, over 30x smaller with comparable balanced accuracy and AUC.
Physics-guided distillation that transfers 3D molecular dynamics knowledge into SMILES language models, improving MoleculeNet property prediction.
Antibody CDR design model post-trained by on-policy distillation, cutting RAbD CDR-H3 backbone RMSD from 2.37 Å to 1.95 Å.
Distilled whole-slide pathology foundation model pairing a 22M-parameter ViT-S tile encoder with a LongNet slide encoder for cohort-scale analysis.
Reasoning LLM that predicts antimicrobial susceptibility of clinical bacterial isolates and supplies mechanistic explanations for each prediction.
Post-hoc method that restores monotonic scaling to ESM-2 embeddings, yielding Matryoshka-style nested representations for variant effect prediction.
Structure-aware transformer that makes zero-shot, per-adenosine predictions of ADAR-mediated A-to-I RNA editing to guide therapeutic guide-RNA design.
Multimodal foundation model that distills Evo 2 into a compact encoder guided by Hi-C data, predicting cell-type-specific 3D genome architecture.
Histopathology foundation model extracting general-purpose features from H&E patches by distilling the UNI, Phikon, and CONCH pathology encoders.
Distilled few-step protein backbone generator that adapts Score Identity Distillation to Proteina for over 20x faster de novo structure sampling.
Structure-based virtual screening model that jointly predicts protein-ligand complex structures and binding fitness from sequence and SMILES.
Antibody, nanobody, and T-cell receptor structure prediction that resolves bound and unbound conformations separately in under a second per domain.
Compact 1.1M-parameter DNA language model distilled from Nucleotide Transformer v2, outperforming its 500M teacher on 11 of 18 benchmark tasks.
Protein-ligand binding affinity model that tokenizes quantum electron-cloud density into discrete codes, plus a distilled cloud-free variant.
Vision transformer that regresses Ki-67-positive and -negative nuclei counts in breast histopathology and scores the index from H&E slides alone.
Spider silk protein language model that generates MaSp repeat sequences from target mechanical properties and predicts those properties from sequence.
Multi-omics foundation model that folds DNA, RNA, and protein into one codon-level nucleotide representation following the central dogma.
Tumor microenvironment segmentation on H&E slides, labeling 13 tissue and cell components from a single model in semantic or panoptic form.
Chromatin loop caller for Hi-C, Micro-C, DNA SPRITE, and single-cell contact maps, pairing axial attention with a U-Net to work at very low coverage.
Wearable accelerometry foundation model distilled from a PPG encoder, predicting cardiovascular and health biomarkers from motion signals alone.