KTH Royal Institute of Technology

Cryo-EM density enhancement for protein-ligand binding sites, sharpening weak ligand maps with a 3D Swin-Conv UNet trained on 6,511 complexes.

Generative imaging model simulating single-cell fluorescence microscopy for all 12,800 human proteins in the Human Protein Atlas.

Flow-matching model that jointly samples 3D de novo molecules and several low-energy conformers, extending to pocket-conditioned ligand design.

Energy-based flow matching for 3D molecular structure, using an idempotent predict-and-refine map for protein backbone generation and ligand docking.

Spider silk protein language model that generates MaSp repeat sequences from target mechanical properties and predicts those properties from sequence.