All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 15 of 5 filtered models

  • AMix-2

    Shanghai AI Laboratory +4 othersMay 30, 2026diffusionfold_classificationfoundation_model+6

    Protein-text foundation model placing amino acid sequences and natural language in one token space for protein understanding and de novo design.

    ProteinLanguage model
    10Openness
  • ENSEMBITS

    7
    Vanderbilt UniversityMay 13, 2026function_predictionmolecular_dynamicsprotein_dynamics+5

    Protein conformational ensemble tokenizer that learns a discrete alphabet of states from molecular dynamics, reusable as a frozen feature layer.

    Protein
    66Openness
  • GATSBI

    13
    Stanford UniversityApril 3, 2026embeddingsfunction_predictiongraph_attention_network+4

    Graph attention model that learns context-aware protein embeddings from protein-protein interaction, co-expression, and tissue association networks.

    Protein
    94Openness
  • BacPT

    1
    University of FloridaMarch 7, 2026bacterial_genomicsenzyme_annotationfoundation_model+6

    Bacterial proteome foundation model that learns contextualized gene and whole-genome representations from tens of thousands of complete genomes.

    Protein
    10Openness
  • Technion – Israel Institute of Technology +1 otherNovember 26, 2025function_predictiongraph_neural_networkmultimodal+4

    Multimodal protein representation model that iteratively fuses a sequence language model with a 3D structure encoder through a shared learnable token.

    Protein
    68Openness