All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 1–14 of 14 filtered models
ScaleSurfer
7——Brain MRI morphometry model that estimates cortical thickness, surface area, and volume in milliseconds instead of hours.
Imaging47OpennessGenBloom
3——Genetically aligned foundation model for blood smear cytology that links single-cell morphology to the chromosomal aberrations behind AML and APL.
Pathology65OpennessBrainDINO
43—Emory University +2 othersApril 30, 2026brain_age_estimationdisease_classificationfoundation_model+6Self-supervised brain MRI foundation model built on DINOv3, pretrained on roughly 6.6 million unlabeled axial slices for neuroimaging tasks.
Imaging49OpennessBiomeGPT
—1—Massachusetts General HospitalJanuary 5, 2026biomarker_discoverydisease_classificationfoundation_model+6Gut microbiome foundation model pretrained on human shotgun metagenomes, learning species-level taxonomic representations for disease prediction.
DNA & GeneLanguage model8OpennessPULSAR
3628224Hierarchical single-cell foundation model that turns scRNA-seq profiles into zero-shot donor-level embeddings for disease and biomarker prediction.
Single-cellProtein58OpennessLSM-MS2
———Foundation model for tandem mass spectrometry that embeds MS/MS spectra into a learned chemical space, resolving isomers and classifying disease.
MetabolomicsSmall molecule4Openness3D-Neuro-SimCLR
912—Self-supervised foundation model for 3D brain MRI, learning transferable anatomical representations from unlabeled scans for disease classification.
Imaging74OpennessHGFM
———Hypergraph foundation model for brain disease diagnosis from resting-state fMRI, self-supervised on high-order connectivity among brain regions.
BiosignalsImaging10OpennessTEDDY
—9—Single-cell RNA-seq foundation models combining masked modeling with ontology supervision to classify cell states across unseen donors and diseases.
Single-cell46Openness- Rensselaer Polytechnic Institute +2 othersFebruary 11, 2025chest_ctdisease_classificationfoundation_model+7
865M-parameter multimodal foundation model that fuses 3D low-dose chest CT with clinical data to answer 17 lung cancer screening questions.
Imaging71Openness M3FM
191.4K—Multimodal medical imaging foundation model for zero-shot clinical diagnosis and report generation from chest X-ray and CT in English and Chinese.
ImagingLanguage model60OpennessSS-CXR
—13—Children's National Hospital +2 othersOctober 27, 2024disease_classificationfoundation_modelradiology+3Self-supervised vision transformer pretrained on chest X-rays to produce a domain-specific foundation model for classification and lung segmentation.
Imaging22OpennessECG-Chat
8046—China University of Geosciences +2 othersAugust 16, 2024cardiologycontrastive_learningdisease_classification+6Multimodal ECG-language model aligning 12-lead waveforms with clinical report text for conversational cardiac diagnosis and report generation.
BiosignalsLanguage model27OpennessECG-FM
29795—Open transformer foundation model for 12-lead electrocardiograms, pretrained on 1.5 million unlabeled ECGs with a wav2vec 2.0 self-supervised recipe.
Biosignals67Openness