All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 113 of 13 filtered models

  • ComplexDesign

    Institute of Computing Technology, Chinese Academy of SciencesJune 24, 2026binder_designde_novo_designgenerative+4

    Hallucination-based multichain protein design framework that co-folds chains and forms the inter-chain interfaces of dimers, trimers, and tetramers.

    Protein
    21Openness
  • BoltzProt-1

    4.1K
    BoltzJune 16, 2026antibodybinder_designfoundation_model+5

    De novo protein binder and nanobody design pipeline that ranks candidates by a protein-protein interaction model rather than structural confidence.

    Protein
    11Openness
  • Promera

    80
    MIT +1 otherJune 10, 2026antibodybinder_designdiffusion+5

    Unified all-atom generative model for biomolecular structure prediction, binder filtering, and controllable protein and nanobody design.

    Protein
    61Openness
  • ESMFold2

    2.9K8261.3K
    BiohubMay 27, 2026antibodybinder_designbiomolecular_complex+5

    Structure-prediction and design engine that turns ESMC sequence representations into all-atom 3D structures of proteins and biomolecular complexes.

    Protein
    61Openness
  • DCFold

    2
    Tsinghua UniversityMay 18, 2026binder_designdiffusionflow_matching+2

    Protein structure prediction and binder design in a single generative step, replacing AlphaFold3's iterative diffusion sampling with one forward pass.

    Protein
    16Openness
  • A-CODE

    University of Illinois Urbana-Champaign +1 otherMay 5, 2026binder_designde_novo_designdiffusion+4

    All-atom protein co-design model that generates sequence and structure together in one unified diffusion process, aimed at hard binder design.

    Protein
    8Openness
  • MoMPNN

    64
    BioGeometry +4 othersMarch 6, 2026binder_designdevelopabilitydirect_preference_optimization+7

    Protein inverse folding model aligning ProteinMPNN by multi-objective preference optimization to improve developability without losing fold fidelity.

    Protein
    34Openness
  • AtomPaint

    Harvard Medical SchoolFebruary 4, 2026binder_designdiffusiongenerative+4

    Full-atom SE(3)-equivariant diffusion model that inpaints binding interfaces to design proteins that bind DNA, RNA, and small molecules.

    ProteinSmall molecule
    19Openness
  • PXDesign

    23623
    ByteDance SeedDecember 17, 2025binder_designde_novo_designdiffusion+4

    De novo protein binder design suite from ByteDance pairing diffusion and hallucination generators with confidence-based filtering of designs.

    Protein
    65Openness
  • BoltzGen

    1K78
    MITNovember 24, 2025antibodybinder_designde_novo_design+5

    All-atom generative model for de novo protein and peptide binder design against diverse biomolecular targets, wet-lab validated across 26 targets.

    ProteinSmall molecule
    78Openness
  • HalluDesign

    84
    Westlake UniversityNovember 8, 2025antibodyantibody_designbinder_design+7

    All-atom protein design framework that co-optimizes sequence and backbone by hallucinating with AlphaFold3-style structure predictors, no fine-tuning.

    Protein
    33Openness
  • RADiAnce

    Tsinghua University +1 otherOctober 12, 2025antibodybinder_designcontrastive_learning+6

    Retrieval-augmented latent diffusion model for protein binder design, retrieving interfaces in a shared latent space across peptides and antibodies.

    Protein
    26Openness
  • EiRA

    2
    Hunan UniversitySeptember 2, 2025binder_designdnagenerative+6

    Protein binder design model post-trained from a multimodal protein language model to bind proteins, peptides, small molecules, and nucleic acids.

    Protein
    13Openness