All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 505528 of 943 models

  • Meta AIJuly 23, 2025cnnconformerelectromyography+7

    Surface-EMG wristband models that decode hand gestures, handwriting, and wrist movement, generalizing across users without per-person calibration.

    Biosignals
    13Openness
  • Microsoft ResearchJuly 21, 2025language_modelmixture_of_expertsprotein_design+2

    Protein language models trained on billions of natural and synthetic sequences for de novo design and zero-shot mutation-effect prediction.

    Protein
    96Openness
  • ABMIL

    1532.6K37
    Mahmood Lab +1 otherJuly 15, 2025attentionhistologyslide_level_classification+1

    Attention-based multiple instance learning heads for whole-slide pathology, pretrained on a 108-way pan-cancer slide classification task.

    Pathology
    26Openness
  • GREmLN

    38
    Chan Zuckerberg Initiative +2 othersJuly 9, 2025cell_type_annotationchromatinfoundation_model+6

    Single-cell transcriptomics foundation model that encodes gene regulatory network structure into self-attention through graph signal processing.

    Single-cell
    80Openness
  • MNCN-CSICJuly 9, 2025bertembeddingsfoundation_model+4

    Zebrafish single-cell foundation model built on the Geneformer framework, producing frozen gene and cell embeddings for developmental analysis.

    Single-cell
    46Openness
  • MedGemma

    1.6K367175.7K
    Google Research +1 otherJuly 9, 2025clinical_reasoningelectronic_health_recordsfine_tuning+8

    Open medical multimodal models from Google, built on Gemma 3 with a medically tuned SigLIP vision encoder for clinical text and image understanding.

    Language modelImaging
    41Openness
  • MedSigLIP

    29836720K
    Google Research +1 otherJuly 9, 2025contrastive_learningembeddingsfoundation_model+7

    Medically tuned SigLIP encoder from Google that maps medical images and text into one embedding space for zero-shot classification and retrieval.

    ImagingPathology
    30Openness
  • TDFold

    Beijing Normal UniversityJuly 5, 2025diffusiongenerativegraph_neural_network+2

    Single-sequence protein structure predictor that adapts image diffusion to generate 2D inter-residue templates, folding proteins without an MSA.

    Protein
    10Openness
  • Chai-2

    57
    Chai DiscoveryJuly 5, 2025antibodyantibody_designde_novo_design+3

    Multimodal all-atom generative model for zero-shot de novo antibody and protein-binder design, validated by wet-lab hit rates from small batches.

    Protein
    7Openness
  • PLMDA-PPI

    101
    Huazhong University of Science and TechnologyJuly 4, 2025graph_neural_networkinterface_contact_predictionprotein_protein_interaction+4

    Protein-protein interaction predictor that adds contact-guided dual attention and a geometric encoder to frozen protein language model embeddings.

    Protein
    77Openness
  • MORPH

    156
    Broad Institute +1 otherJuly 2, 2025attentioncell_paintingfoundation_model+5

    Single-cell perturbation-response model that predicts transcriptomic and imaging outcomes of unseen genetic perturbations via a VAE with attention.

    Single-cellImaging
    7Openness
  • University of Oxford +5 othersJuly 1, 2025clinical_outcome_predictioncross_modality_generationdiagnosis+8

    Multimodal foundation model for cardiac biosignals, pretrained by masked modeling on ECG, PPG, and clinical text from ~1.7 million individuals.

    BiosignalsLanguage model
    26Openness
  • University of Rijeka +1 otherJuly 1, 2025cnnfoundation_modelimage_classification+4

    Family of CNN foundation models pretrained on multimodal radiology images, a domain-specific alternative to ImageNet transfer learning weights.

    Imaging
    53Openness
  • Chongqing University of TechnologyJuly 1, 2025histologyinstruction_tuningmedical_image_understanding+5

    Biomedical vision-language assistant for medical visual question answering, pairing Phi-2 with a vision encoder in a 4.2B-parameter model.

    ImagingLanguage model
    15Openness
  • AppleJune 30, 2025foundation_modelmambarepresentation_learning+3

    Apple's foundation model trained on behavioral signals from wearables, modeling 27 HealthKit metrics to improve predictions across 57 health tasks.

    Biosignals
    7Openness
  • AlphaGenome

    2K149
    Google DeepMindJune 27, 2025chromatinfoundation_modelgene_expression+4

    DNA foundation model that predicts thousands of functional genomic tracks, from expression and splicing to chromatin, at single base-pair resolution.

    DNA & Gene
    49Openness
  • MELP

    311814
    The University of Hong KongJune 27, 2025contrastive_learningecg_classificationelectrocardiogram+4

    Multi-scale ECG-language model that aligns 12-lead ECG signals with clinical text at token, beat, and rhythm levels for zero-shot cardiac diagnosis.

    BiosignalsLanguage model
    68Openness
  • STATE

    622116249
    Arc InstituteJune 27, 2025drug_discoveryfoundation_modelgene_expression+4

    Virtual cell transformer that predicts how cells respond to genetic, chemical, or signaling perturbations, generalizing to unseen cellular contexts.

    Single-cell
    21Openness
  • MOJO

    4041
    InstaDeepJune 25, 2025bertdna_methylationfoundation_model+7

    Bimodal masked language model that jointly encodes bulk RNA-seq expression and DNA methylation into patient-level embeddings for cancer genomics.

    RNADNA & Gene
    29Openness
  • University of Oregon +1 otherJune 24, 2025ancestral_recombination_graph_inferencecoalescence_time_estimationgenomics+4

    Decoder-only transformer that recasts ancestral recombination graph inference as next-token prediction, estimating coalescence times from variation.

    DNA & Gene
    83Openness
  • Monash UniversityJune 23, 2025classificationconnectomicsfmri+7

    5.6M-parameter multimodal foundation model fusing fMRI time series with diffusion-MRI structural connectivity in a shared ROI embedding space.

    ImagingBiosignals
    71Openness
  • EyeCLIP

    8763
    The Hong Kong Polytechnic University +5 othersJune 21, 2025clipcontrastive_learningcross_modal_retrieval+11

    CLIP-based vision-language foundation model for eye imaging, enabling zero-shot disease detection and cross-modal retrieval across 11 modalities.

    ImagingLanguage model
    15Openness
  • Chiron-o1

    601410
    Shanghai AI Laboratory +2 othersJune 20, 2025chain_of_thoughtclinical_reasoninghistology+6

    Medical multimodal LLM (2B and 8B) trained for generalizable, step-by-step clinical reasoning via Mentor-Intern Collaborative Search.

    PathologyImaging
    67Openness
  • LucaVirus

    745216
    Sun Yat-sen University +1 otherJune 14, 2025antibody_designfoundation_modelgenomics+8

    Multimodal viral foundation model over nucleotide and protein sequence, built for virus discovery, function annotation, and antibody design.

    DNA & GeneProtein
    88Openness