All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 505–528 of 943 models
Surface-EMG wristband models that decode hand gestures, handwriting, and wrist movement, generalizing across users without per-person calibration.
Biosignals13OpennessDayhoff Atlas
9911—Protein language models trained on billions of natural and synthetic sequences for de novo design and zero-shot mutation-effect prediction.
Protein96OpennessABMIL
1532.6K37Attention-based multiple instance learning heads for whole-slide pathology, pretrained on a 108-way pan-cancer slide classification task.
Pathology26OpennessGREmLN
38——Single-cell transcriptomics foundation model that encodes gene regulatory network structure into self-attention through graph signal processing.
Single-cell80OpennessZebraformer
—1—Zebrafish single-cell foundation model built on the Geneformer framework, producing frozen gene and cell embeddings for developmental analysis.
Single-cell46OpennessMedGemma
1.6K367175.7KOpen medical multimodal models from Google, built on Gemma 3 with a medically tuned SigLIP vision encoder for clinical text and image understanding.
Language modelImaging41OpennessMedSigLIP
29836720KMedically tuned SigLIP encoder from Google that maps medical images and text into one embedding space for zero-shot classification and retrieval.
ImagingPathology30OpennessTDFold
———Single-sequence protein structure predictor that adapts image diffusion to generate 2D inter-residue templates, folding proteins without an MSA.
Protein10OpennessChai-2
—57—Multimodal all-atom generative model for zero-shot de novo antibody and protein-binder design, validated by wet-lab hit rates from small batches.
Protein7OpennessPLMDA-PPI
101—Huazhong University of Science and TechnologyJuly 4, 2025graph_neural_networkinterface_contact_predictionprotein_protein_interaction+4Protein-protein interaction predictor that adds contact-guided dual attention and a geometric encoder to frozen protein language model embeddings.
Protein77OpennessMORPH
156—Single-cell perturbation-response model that predicts transcriptomic and imaging outcomes of unseen genetic perturbations via a VAE with attention.
Single-cellImaging7Openness- University of Oxford +5 othersJuly 1, 2025clinical_outcome_predictioncross_modality_generationdiagnosis+8
Multimodal foundation model for cardiac biosignals, pretrained by masked modeling on ECG, PPG, and clinical text from ~1.7 million individuals.
BiosignalsLanguage model26Openness RadiologyNET
58—Family of CNN foundation models pretrained on multimodal radiology images, a domain-specific alternative to ImageNet transfer learning weights.
Imaging53OpennessSigPhi-Med
593Chongqing University of TechnologyJuly 1, 2025histologyinstruction_tuningmedical_image_understanding+5Biomedical vision-language assistant for medical visual question answering, pairing Phi-2 with a vision encoder in a 4.2B-parameter model.
ImagingLanguage model15OpennessApple's foundation model trained on behavioral signals from wearables, modeling 27 HealthKit metrics to improve predictions across 57 health tasks.
Biosignals7OpennessAlphaGenome
2K149—DNA foundation model that predicts thousands of functional genomic tracks, from expression and splicing to chromatin, at single base-pair resolution.
DNA & Gene49OpennessMELP
311814Multi-scale ECG-language model that aligns 12-lead ECG signals with clinical text at token, beat, and rhythm levels for zero-shot cardiac diagnosis.
BiosignalsLanguage model68OpennessSTATE
622116249Virtual cell transformer that predicts how cells respond to genetic, chemical, or signaling perturbations, generalizing to unseen cellular contexts.
Single-cell21Openness- University of Oregon +1 otherJune 24, 2025ancestral_recombination_graph_inferencecoalescence_time_estimationgenomics+4
Decoder-only transformer that recasts ancestral recombination graph inference as next-token prediction, estimating coalescence times from variation.
DNA & Gene83Openness 5.6M-parameter multimodal foundation model fusing fMRI time series with diffusion-MRI structural connectivity in a shared ROI embedding space.
ImagingBiosignals71OpennessEyeCLIP
8763—The Hong Kong Polytechnic University +5 othersJune 21, 2025clipcontrastive_learningcross_modal_retrieval+11CLIP-based vision-language foundation model for eye imaging, enabling zero-shot disease detection and cross-modal retrieval across 11 modalities.
ImagingLanguage model15OpennessChiron-o1
601410Medical multimodal LLM (2B and 8B) trained for generalizable, step-by-step clinical reasoning via Mentor-Intern Collaborative Search.
PathologyImaging67OpennessLucaVirus
745216Multimodal viral foundation model over nucleotide and protein sequence, built for virus discovery, function annotation, and antibody design.
DNA & GeneProtein88Openness