All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 25–38 of 38 filtered models
SubCell
612—Chan Zuckerberg Initiative +2 othersDecember 8, 2024cell_biologyfluorescence_microscopyfoundation_model+3Vision transformers trained on Human Protein Atlas fluorescence microscopy for subcellular protein localization and cell morphology representation.
Imaging84OpennessCELL-Diff
7——Diffusion model translating in both directions between protein sequences and fluorescence microscopy images to predict subcellular localization.
Imaging87OpennessDynaCLR
1023—Self-supervised contrastive model embedding cell and organelle dynamics from time-lapse microscopy for cell-state analysis without manual labels.
Imaging71OpennessCellFM
11078—Single-cell foundation model with 800M parameters trained on ~100 million human cells, for annotation, perturbation prediction, and gene analysis.
Single-cell26OpennessCytoland
1029—Virtual staining models that translate label-free light microscopy into fluorescent-equivalent predictions of nuclei and plasma membranes.
Imaging99OpennessCellSAM
20843—Universal cell segmentation model adapting Meta's SAM to segment mammalian cells, yeast, and bacteria across imaging modalities without retraining.
Imaging32OpennessMoTT
137—Transformer-based single particle tracker for fluorescence microscopy, using multi-hypothesis attention to link particles at low SNR and high density.
Imaging20OpennessBrain TokenGT
2514—Tokenized graph transformer that embeds longitudinal brain functional connectomes from fMRI for interpretable neurodegenerative disease diagnosis.
Imaging26OpennessCellpose 2.0
2.3K1.1K—Human-in-the-loop cell segmentation framework enabling custom model training from as few as 100-200 corrected annotations.
Imaging59OpennessCellpose
2.3K3.6K—Generalist deep learning algorithm for cell and nucleus instance segmentation using simulated diffusion flows, without per-dataset retraining.
Imaging92Opennesspytorch_fnet
162493—3D convolutional network that predicts subcellular fluorescence labels from transmitted-light microscopy, enabling label-free imaging of living cells.
Imaging26Openness