Lab

Theis Lab

Computational biology lab at Helmholtz Munich specializing in single-cell analysis and machine learning

Location: Munich, Germany
Website
5 models

Models (5)

scConcept

Theis Lab / Helmholtz Munich

Released October 14, 2025

6232

Transformer-based contrastive pretraining framework that learns technology-agnostic single-cell representations by contrasting cell views instead of reconstructing gene expression.

Single-cell

MuBind

Theis Lab

Released August 8, 2024

127

Deep learning model predicting single-cell read counts from DNA sequence features and cell transition graphs to identify transcriptional regulators.

Single-cell

IMPA

Theis Lab

Released January 8, 2024

4926

Generative image perturbation autoencoder that predicts cellular morphological responses to chemical and genetic perturbations using untreated cell images as input.

Single-cell

CPA

Theis Lab

Released April 15, 2021

285146

Compositional Perturbation Autoencoder that predicts single-cell transcriptional responses to unseen drug combinations and doses using disentangled latent representations.

Single-cell

scGen

Theis Lab

Released July 29, 2019

617348

Variational autoencoder that predicts single-cell perturbation responses across cell types and species using latent space vector arithmetic.

Single-cell