All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 313336 of 552 filtered models

  • NatureLM

    3537
    Microsoft Research AI for ScienceFebruary 11, 2025drug_discoveryfoundation_modelmaterials_science+2

    Unified science foundation model treating molecules, proteins, RNA, DNA, and materials as one sequence language, in 1B, 8B, and 46.7B sizes.

    Language modelSmall moleculeProtein
    27Openness
  • Rensselaer Polytechnic Institute +2 othersFebruary 11, 2025chest_ctdisease_classificationfoundation_model+7

    865M-parameter multimodal foundation model that fuses 3D low-dose chest CT with clinical data to answer 17 lung cancer screening questions.

    Imaging
    71Openness
  • KAIST +1 otherFebruary 7, 2025disease_diagnosisfmrifoundation_model+6

    Functional MRI foundation model that learns brain dynamics as a stochastic optimal control problem, self-supervised on 41,072 UK Biobank subjects.

    Biosignals
    8Openness
  • M3FM

    1938
    University of Oxford +6 othersFebruary 6, 2025chest_x_rayclipcontrastive_learning+9

    Multimodal medical imaging foundation model for zero-shot clinical diagnosis and report generation from chest X-ray and CT in English and Chinese.

    ImagingLanguage model
    60Openness
  • DOE Joint Genome Institute +6 othersFebruary 5, 2025de_novo_designfoundation_modelgenerative+6

    4B-parameter generative genome foundation model trained on assembled environmental metagenomes for microbial representation and de novo DNA design.

    DNA & Gene
    49Openness
  • FM-CT

    6213
    NYU Grossman School of MedicineFebruary 4, 2025disease_detectionfoundation_modelhead_ct+4

    Self-supervised 3D vision foundation model for non-contrast head CT, pretrained on 361,663 scans to detect a broad range of intracranial disease.

    Imaging
    26Openness
  • Pulse-PPG

    7345
    University of Memphis +1 otherFebruary 3, 2025cnncontrastive_learningfoundation_model+5

    Photoplethysmography foundation model pretrained on raw wearable signals from a field study, transferring across lab and field health tasks.

    Biosignals
    64Openness
  • MINIM

    158138
    Peking University +2 othersFebruary 1, 2025data_augmentationdiffusionfoundation_model+9

    Text-to-image diffusion model that generates synthetic medical images across imaging modalities and organs to augment scarce clinical training data.

    Imaging
    41Openness
  • SNPBag

    15
    Zhejiang LabJanuary 29, 2025embeddingsfoundation_modelgenomics+3

    Genomics foundation model for genome-scale SNP analysis, handling imputation, phasing, ancestry, and relatedness from one 0.8B-parameter checkpoint.

    DNA & Gene
    29Openness
  • MedicoSAM

    319
    Computational Cell AnalyticsJanuary 20, 2025foundation_modelinteractive_annotationmedical_imaging+4

    Segment Anything Model finetuned on diverse medical images, giving a reusable promptable checkpoint for interactive and automatic image segmentation.

    Imaging
    77Openness
  • Brainfound

    4
    Tsinghua University +2 othersJanuary 10, 2025contrastive_learningcross_modality_translationdiffusion+9

    Multimodal vision-text foundation model for brain CT and MRI, pretrained on roughly 10 million image-report pairs to act as a clinical copilot.

    ImagingLanguage model
    7Openness
  • MUSK

    240283
    Stanford University +1 otherJanuary 8, 2025cross_modal_retrievalfoundation_modelhistology+9

    Vision-language foundation model for precision oncology, pretrained on 50M pathology images and 1B text tokens via unified masked modeling.

    PathologyLanguage model
    12Openness
  • Evolla

    69239
    Westlake UniversityJanuary 6, 2025foundation_modellanguage_modelmultimodal+2

    Multimodal 80B-parameter protein-language model that answers natural language questions about protein function from sequence and structure.

    Protein
    67Openness
  • ProteinDT

    107106
    UC BerkeleyJanuary 1, 2025contrastive_learningdrug_discoveryfoundation_model+1

    Text-guided protein design framework aligning language with sequences for text-conditioned generation, zero-shot editing, and property prediction.

    Protein
    52Openness
  • SABER

    18
    Chan Zuckerberg InitiativeJanuary 1, 2025cryo_etfoundation_modelsegmentation+3

    Cryo-ET segmentation framework adapting SAM2 to vesicles and membrane-bound compartments in tomograms and 2D micrographs, zero-shot or fine-tuned.

    Imaging
    78Openness
  • ECGFM-KED

    4352
    Shanghai Jiao Tong UniversityDecember 18, 2024cardiologycnncontrastive_learning+7

    Knowledge-enhanced ECG foundation model aligning a ResNet encoder with LLM-generated disease descriptions for zero- and few-shot interpretation.

    Biosignals
    30Openness
  • AppleDecember 15, 2024activity_recognitionbiomarker_predictioncardiovascular_health+6

    Wearable accelerometry foundation model distilled from a PPG encoder, predicting cardiovascular and health biomarkers from motion signals alone.

    Biosignals
    5Openness
  • NormWear

    5931116
    University of California, San DiegoDecember 12, 2024disease_risk_predictionfoundation_modelmultimodal+5

    Multimodal foundation model for wearable physiological sensing across PPG, ECG, EEG, GSR, and IMU signals, using channel-aware attention.

    Biosignals
    77Openness
  • ProCyon

    6013
    Harvard Medical School +1 otherDecember 11, 2024drug_discoveryfoundation_modelmultimodal+6

    Multimodal foundation model integrating protein sequence, structure, and natural language to model and generate protein phenotypes across scales.

    ProteinLanguage modelSmall molecule
    83Openness
  • CBraMod

    329185
    Zhejiang UniversityDecember 10, 2024brain_computer_interfaceeegeeg_decoding+4

    EEG foundation model for brain-computer interface decoding, factorizing self-attention into parallel spatial and temporal branches.

    Biosignals
    78Openness
  • SubCell

    612
    Chan Zuckerberg Initiative +2 othersDecember 8, 2024cell_biologyfluorescence_microscopyfoundation_model+3

    Vision transformers trained on Human Protein Atlas fluorescence microscopy for subcellular protein localization and cell morphology representation.

    Imaging
    84Openness
  • BioEmu-1

    855340
    MicrosoftDecember 5, 2024conformational_ensemblefoundation_modelgenerative+3

    Generative model that emulates protein equilibrium ensembles, sampling cryptic pockets and unfolded states far faster than molecular dynamics.

    Protein
    71Openness
  • BME-X

    6876
    University of North Carolina at Chapel HillDecember 5, 2024cnndenoisingfoundation_model+5

    Tissue-aware foundation model that restores brain MRI quality across motion correction, super-resolution, denoising, and harmonization.

    Imaging
    70Openness
  • BrainIAC

    13924
    Mass General Brigham +4 othersDecember 2, 2024brain_age_predictionbrain_mricontrastive_learning+7

    Self-supervised vision foundation model for structural brain MRI, providing a reusable encoder for brain age, survival, and image classification.

    Imaging
    24Openness