All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 4972 of 168 filtered models

  • BioCLIP 2

    774348.7K
    Imageomics InstituteMay 29, 2025biodiversitycontrastive_learningfoundation_model+6

    Vision foundation model for the tree of life, trained on 214 million organism images across 952,000 taxa for zero-shot species classification.

    Imaging
    93Openness
  • Cellpose-SAM

    2.3K192
    HHMI Janelia Research CampusMay 1, 2025cell_biologyfoundation_modelgeneralist_model+4

    Generalist cell segmentation model pairing SAM's ViT-L encoder with Cellpose flow fields, outperforming average human annotators on its benchmark.

    Imaging
    50Openness
  • University of Cambridge +1 otherMay 1, 2025brain_mrifoundation_modelhypergraph_neural_network+5

    Brain MRI segmentation foundation model trained on 66,000+ image-label pairs across 14 MRI sub-modalities, with a hypergraph dynamic adapter.

    Imaging
    26Openness
  • UniBiomed

    7110119
    Hong Kong University of Science and Technology +2 othersApril 30, 2025foundation_modelhistologymultimodal+6

    Universal foundation model that jointly generates diagnostic text and segments the corresponding targets across ten biomedical imaging modalities.

    ImagingLanguage model
    64Openness
  • OmniEM

    4
    Peking UniversityApril 19, 2025electron_microscopyfoundation_modelsegmentation+2

    Unified electron microscopy image analysis toolkit built on EM-DINO, a vision foundation model pretrained on 5 million diverse EM images.

    Imaging
    4Openness
  • Swin-BOB

    504
    University of OxfordApril 9, 2025foundation_modelmrisegmentation+3

    3D MRI organ segmentation foundation model built on Swin-UNETR and trained on the UKBOB whole-body dataset covering 72 organs and skeletal structures.

    Imaging
    64Openness
  • GMAI-VL-R1

    1929
    Shanghai AI Laboratory +6 othersApril 2, 2025histologylanguage_modelmedical_image_diagnosis+7

    General medical vision-language model trained with reinforcement learning to reason step by step over medical images for diagnosis and visual QA.

    ImagingLanguage model
    17Openness
  • HGFM

    37
    Tsinghua University +2 othersApril 1, 2025brain_connectivitydisease_classificationfew_shot+6

    Hypergraph foundation model for brain disease diagnosis from resting-state fMRI, self-supervised on high-order connectivity among brain regions.

    BiosignalsImaging
    10Openness
  • Med-R1

    128140
    Emory University +4 othersMarch 18, 2025disease_diagnosisgenerativehistology+7

    Medical vision-language model trained with reinforcement learning for generalizable reasoning across eight imaging modalities and five question types.

    ImagingLanguage model
    45Openness
  • University of Zurich +1 otherMarch 3, 2025conditional_generationdiffusiongenerative+3

    Patch-based 3D diffusion model that generates teravoxel-scale virtual mouse brain volumes conditioned on spatially resolved gene expression.

    Spatial omicsImaging
    78Openness
  • Hunan Normal University +1 otherFebruary 27, 2025cnnfoundation_modelsegmentation+3

    Universal ultrasound segmentation foundation model adapting the Segment Anything Model to eight anatomical regions in a single promptable network.

    Imaging
    14Openness
  • MedVLM-R1

    321911.2K
    Technical University of Munich +2 othersFebruary 26, 2025medical_reasoningmultimodalradiology+4

    2B-parameter medical vision-language model that uses reinforcement learning to show interpretable reasoning for radiology visual question answering.

    ImagingLanguage model
    83Openness
  • D-LMBmapX

    41
    MRC Laboratory of Molecular BiologyFebruary 25, 2025connectomicsfoundation_modelimage_registration+3

    Whole-brain axon and soma segmentation foundation model and registration pipeline for developmental connectomics, with no per-stage retraining.

    Imaging
    23Openness
  • FetalCLIP

    7022
    Mohamed bin Zayed University of Artificial Intelligence +1 otherFebruary 20, 2025classificationcontrastive_learningfoundation_model+7

    Vision-language foundation model for fetal ultrasound, pretrained on 210,035 image-text pairs for plane classification, biometry, and segmentation.

    Imaging
    13Openness
  • LLaVA-Rad

    5874556
    Microsoft ResearchFebruary 20, 2025chest_x_rayfoundation_modelimage_text_retrieval+5

    Chest X-ray vision-language model that drafts the findings section of a radiology report, at 7B parameters small enough to run on a single GPU.

    ImagingLanguage model
    35Openness
  • HealthGPT

    1.6K11538
    Zhejiang University +4 othersFebruary 14, 2025histologyimage_reconstructionmedical_image_generation+7

    Medical vision-language model that unifies image comprehension and generation in one autoregressive transformer via heterogeneous LoRA adapters.

    PathologyImaging
    68Openness
  • Rensselaer Polytechnic Institute +2 othersFebruary 11, 2025chest_ctdisease_classificationfoundation_model+7

    865M-parameter multimodal foundation model that fuses 3D low-dose chest CT with clinical data to answer 17 lung cancer screening questions.

    Imaging
    71Openness
  • M3FM

    1938
    University of Oxford +6 othersFebruary 6, 2025chest_x_rayclipcontrastive_learning+9

    Multimodal medical imaging foundation model for zero-shot clinical diagnosis and report generation from chest X-ray and CT in English and Chinese.

    ImagingLanguage model
    60Openness
  • FM-CT

    6213
    NYU Grossman School of MedicineFebruary 4, 2025disease_detectionfoundation_modelhead_ct+4

    Self-supervised 3D vision foundation model for non-contrast head CT, pretrained on 361,663 scans to detect a broad range of intracranial disease.

    Imaging
    26Openness
  • Chan Zuckerberg InitiativeFebruary 1, 2025cnncryo_etparticle_picking+3

    Cryo-ET particle picking model that averages tiny, medium, and large 3D U-Nets pretrained on simulated tomograms and fine-tuned on experimental data.

    Imaging
    86Openness
  • Cellpose 3

    2.3K385
    HHMI Janelia Research CampusFebruary 1, 2025cell_biologygeneralist_modelimage_restoration+2

    Generalist cell segmentation pairing the cyto3 super-generalist model with one-click networks that denoise, deblur, and upsample microscopy images.

    Imaging
    65Openness
  • Chan Zuckerberg InitiativeFebruary 1, 2025cnncryo_etparticle_picking+3

    Cryo-ET particle picking ensemble of three 3D segmentation models predicting particle-center heatmaps with ResNet50d and EfficientNetV2-M backbones.

    Imaging
    95Openness
  • TopCUP

    3
    Chan Zuckerberg InitiativeFebruary 1, 2025cnncryo_etparticle_picking+3

    Cryo-ET particle picking model, an ensemble of 3D U-Nets with EfficientNet encoders that finds protein complexes in tomograms by heatmap segmentation.

    Imaging
    96Openness
  • BPD

    2
    Chan Zuckerberg InitiativeFebruary 1, 2025cnncryo_etparticle_picking+3

    Cryo-ET particle picking model that localizes six protein complexes in tomograms using an ensemble of lightweight 3D U-Nets.

    Imaging
    67Openness