All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 49–72 of 168 filtered models
BioCLIP 2
774348.7KVision foundation model for the tree of life, trained on 214 million organism images across 952,000 taxa for zero-shot species classification.
Imaging93OpennessCellpose-SAM
2.3K192—Generalist cell segmentation model pairing SAM's ViT-L encoder with Cellpose flow fields, outperforming average human annotators on its benchmark.
Imaging50OpennessSAM-Brain3D
59—Brain MRI segmentation foundation model trained on 66,000+ image-label pairs across 14 MRI sub-modalities, with a hypergraph dynamic adapter.
Imaging26OpennessUniBiomed
7110119Hong Kong University of Science and Technology +2 othersApril 30, 2025foundation_modelhistologymultimodal+6Universal foundation model that jointly generates diagnostic text and segments the corresponding targets across ten biomedical imaging modalities.
ImagingLanguage model64OpennessOmniEM
—4—Unified electron microscopy image analysis toolkit built on EM-DINO, a vision foundation model pretrained on 5 million diverse EM images.
Imaging4OpennessSwin-BOB
504—3D MRI organ segmentation foundation model built on Swin-UNETR and trained on the UKBOB whole-body dataset covering 72 organs and skeletal structures.
Imaging64OpennessGMAI-VL-R1
1929—General medical vision-language model trained with reinforcement learning to reason step by step over medical images for diagnosis and visual QA.
ImagingLanguage model17OpennessHGFM
—37—Hypergraph foundation model for brain disease diagnosis from resting-state fMRI, self-supervised on high-order connectivity among brain regions.
BiosignalsImaging10OpennessMed-R1
128140—Medical vision-language model trained with reinforcement learning for generalizable reasoning across eight imaging modalities and five question types.
ImagingLanguage model45OpennessTera-MIND
12—Patch-based 3D diffusion model that generates teravoxel-scale virtual mouse brain volumes conditioned on spatially resolved gene expression.
Spatial omicsImaging78OpennessSAM-MedUS
27—Universal ultrasound segmentation foundation model adapting the Segment Anything Model to eight anatomical regions in a single promptable network.
Imaging14OpennessMedVLM-R1
321911.2K2B-parameter medical vision-language model that uses reinforcement learning to show interpretable reasoning for radiology visual question answering.
ImagingLanguage model83OpennessD-LMBmapX
41——MRC Laboratory of Molecular BiologyFebruary 25, 2025connectomicsfoundation_modelimage_registration+3Whole-brain axon and soma segmentation foundation model and registration pipeline for developmental connectomics, with no per-stage retraining.
Imaging23OpennessFetalCLIP
7022—Mohamed bin Zayed University of Artificial Intelligence +1 otherFebruary 20, 2025classificationcontrastive_learningfoundation_model+7Vision-language foundation model for fetal ultrasound, pretrained on 210,035 image-text pairs for plane classification, biometry, and segmentation.
Imaging13OpennessLLaVA-Rad
5874556Chest X-ray vision-language model that drafts the findings section of a radiology report, at 7B parameters small enough to run on a single GPU.
ImagingLanguage model35OpennessHealthGPT
1.6K11538Zhejiang University +4 othersFebruary 14, 2025histologyimage_reconstructionmedical_image_generation+7Medical vision-language model that unifies image comprehension and generation in one autoregressive transformer via heterogeneous LoRA adapters.
PathologyImaging68Openness- Rensselaer Polytechnic Institute +2 othersFebruary 11, 2025chest_ctdisease_classificationfoundation_model+7
865M-parameter multimodal foundation model that fuses 3D low-dose chest CT with clinical data to answer 17 lung cancer screening questions.
Imaging71Openness M3FM
1938—Multimodal medical imaging foundation model for zero-shot clinical diagnosis and report generation from chest X-ray and CT in English and Chinese.
ImagingLanguage model60OpennessFM-CT
6213—Self-supervised 3D vision foundation model for non-contrast head CT, pretrained on 361,663 scans to detect a broad range of intracranial disease.
Imaging26OpennessCryo-ET particle picking model that averages tiny, medium, and large 3D U-Nets pretrained on simulated tomograms and fine-tuned on experimental data.
Imaging86OpennessCellpose 3
2.3K385—Generalist cell segmentation pairing the cyto3 super-generalist model with one-click networks that denoise, deblur, and upsample microscopy images.
Imaging65OpennessMonjuDetectHM
211—Cryo-ET particle picking ensemble of three 3D segmentation models predicting particle-center heatmaps with ResNet50d and EfficientNetV2-M backbones.
Imaging95OpennessTopCUP
3——Cryo-ET particle picking model, an ensemble of 3D U-Nets with EfficientNet encoders that finds protein complexes in tomograms by heatmap segmentation.
Imaging96OpennessBPD
2——Cryo-ET particle picking model that localizes six protein complexes in tomograms using an ensemble of lightweight 3D U-Nets.
Imaging67Openness