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Imaging foundation models
Imaging

USFM

Fudan University

Ultrasound foundation model pretrained on over two million multi-organ images, transferring to segmentation, classification, and image enhancement.

Released: August 2024

USFM (Universal Ultrasound Foundation Model) is a self-supervised foundation model for medical ultrasound image analysis, developed by the Laboratory of Medical Imaging and Artificial Intelligence at Fudan University and published in Medical Image Analysis in 2024. Ultrasound is among the most widely used clinical imaging modalities, but deep-learning models for it have historically been narrow: trained organ-by-organ and task-by-task, requiring large annotated datasets that are costly to acquire because ultrasound interpretation depends on specialist expertise. USFM aims to break this bottleneck with a single pretrained backbone that transfers across organs, diseases, and task types.

The model addresses two challenges that make ultrasound harder to model than natural images or other medical scans. First, ultrasound images are noisy and low-contrast, with speckle and operator-dependent acquisition that obscure anatomical structure. Second, pretraining data must span many organs and devices to generalize. To handle these, USFM is pretrained on a large multi-organ, multi-center, multi-device database of over two million ultrasound images using a novel spatial-frequency dual masked image modeling objective designed to learn robust features despite degraded image quality.

By learning general-purpose ultrasound representations once and fine-tuning them on small labeled datasets, USFM positions itself as a label-efficient backbone for the full spectrum of downstream ultrasound tasks rather than a single-purpose classifier or segmenter.

#Key Features

  • Spatial-frequency dual masked image modeling: USFM extends masked image modeling with a frequency band-stop masking branch alongside spatial masking, forcing the model to reconstruct information in both the image and frequency domains for more robust feature learning on noisy ultrasound.
  • Multi-organ, multi-device pretraining: Self-supervised pretraining on 2M+ ultrasound images from many organs, centers, and devices, with organ-balanced sampling to avoid bias toward data-rich anatomies.
  • Task-agnostic transfer: A single backbone supports segmentation, classification, and image enhancement/restoration across diverse organs and diseases without task-specific architectural redesign.
  • Label efficiency: Achieves strong downstream performance with as little as 20% of the annotations required by training from scratch, reducing the expert-labeling burden that limits clinical ultrasound AI.
  • Open weights and code: Pretrained weights and fine-tuning code are released publicly, including a toy dataset for reproducing the segmentation and classification pipelines.

#Technical Details

USFM uses a Vision Transformer (ViT) backbone pretrained with a self-supervised spatial-frequency dual masked image modeling scheme. The spatial branch follows masked image modeling with a noise addition-and-recovery formulation suited to ultrasound speckle, while the frequency branch applies band-stop masking so the model must recover suppressed frequency components. Pretraining draws on a curated database of more than two million ultrasound images spanning multiple organs, clinical centers, and ultrasound devices, with organ-balanced sampling to promote generalizability. For downstream evaluation, the pretrained encoder is paired with standard task heads (for example SegViT or UperNet for segmentation), and the authors report that USFM matches or exceeds competing approaches across segmentation, classification, and image-enhancement benchmarks while using substantially fewer labeled examples and fewer training epochs. Released weights (USFM_latest.pth) are distributed under a CC-BY-NC 4.0 license.

#Applications

USFM serves as a transferable backbone for clinical and research ultrasound analysis: segmenting lesions and anatomical structures, classifying disease (such as benign-versus-malignant assessment), and enhancing low-quality scans. Researchers and clinical AI developers benefit most, because the pretrained model lets them build accurate task-specific systems from small annotated datasets, lowering the barrier for ultrasound applications across organs—breast, thyroid, liver, cardiac, obstetric, and others—where assembling large expert-labeled corpora is impractical.

#Impact

USFM is among the first general-purpose foundation models targeted specifically at medical ultrasound, a modality long underserved relative to CT, MRI, and histopathology in foundation-model research. By demonstrating that a single self-supervised backbone can generalize across organs and tasks while cutting annotation requirements, it provides a practical template for label-efficient ultrasound AI and has been incorporated into the OpenMedLab ecosystem of open medical foundation models. Its main limitations are those common to the class: the pretraining corpus, while large and diverse, is not fully described publicly, the weights are restricted to non-commercial use, and downstream performance still depends on quality fine-tuning data for each clinical target.

Citation

USFM: A universal ultrasound foundation model generalized to tasks and organs towards label efficient image analysis

Jiao, J., et al. (2023) USFM: A universal ultrasound foundation model generalized to tasks and organs towards label efficient image analysis. Medical Image Anal..

DOI: 10.1016/j.media.2024.103202

Recent citations

Papers that recently cited this model.

  • Fractal-guided multi-scale contrastive learning for robust liver tumor classification in ultrasound

    Xuping Zhang, Qingyu Zhang, Tao Zhang, et al.

    Engineering applications of artificial intelligence · Aug 2026

    0
  • Vision Foundation Models in Radiology: A Scoping Review of Data, Methodology, Evaluation and Clinical Translation

    A. Vergara-Richart, Xavier Rafael-Palou, A. Fuster-Matanzo, et al.

    Jul 2026

    0Influential
  • Wavelet-inspired diffusion model with near-field constraint for real-time echocardiography dehazing.

    Xue Gao, Peng Huang, Fangyan Tian, et al.

    Medical Image Analysis · Jul 2026

    0

Top citations

The most-cited papers that cite this model.

  • A Comprehensive Survey of Foundation Models in Medicine

    Wasif Khan, Seowung Leem, Kyle B. See, et al.

    IEEE Reviews in Biomedical Engineering · Jun 2024

    115
  • Generative artificial intelligence in medicine

    Zhen Ling Teo, A. Thirunavukarasu, Kabilan Elangovan, et al.

    Nature Medicine · Oct 2025

    43
  • SAM-Med3D: A Vision Foundation Model for General-Purpose Segmentation on Volumetric Medical Images

    Haoyu Wang, Sizheng Guo, Jin Ye, et al.

    IEEE Transactions on Neural Networks and Learning Systems · Jul 2025

    42
  • Ultrasam: a foundation model for ultrasound using large open-access segmentation datasets

    A. Meyer, Aditya Murali, Farahdiba Zarin, et al.

    International Journal of Computer Assisted Radiology and Surgery · Nov 2024

    29
  • Visual–language foundation models in medicine

    Chunyu Liu, Yixiao Jin, Zhouyu Guan, et al.

    The Visual Computer · Jul 2024

    29

Related models

Models with similar goals, methods, or subject matter.

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    Imaging
  • UltraSam

    University of Strasbourg

    Promptable ultrasound image segmentation foundation model, a SAM adaptation trained on US-43d, the largest public ultrasound segmentation corpus.

    Imaging
  • MIS-FM

    University of Electronic Science and Technology of China / Shanghai AI Laboratory / SenseTime / Sichuan University

    Self-supervised foundation model for 3D medical image segmentation, pretrained on roughly 110,000 unannotated CT volumes via Volume Fusion.

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  • VisionFM

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    Multi-modal ophthalmic foundation model for generalist eye AI, spanning fundus imaging and OCT for disease screening, segmentation, and biomarkers.

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  • BrainFM

    Johns Hopkins University / Massachusetts General Hospital / Harvard Medical School / Danish Research Centre for Magnetic Resonance / University College London

    Modality-agnostic foundation model for human brain imaging that runs five core neuroimaging tasks across uncalibrated CT and MRI without retraining.

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Citations

Total Citations112
Influential12
References45

GitHub

Stars350
Forks34
Open Issues21
Contributors1
Last Push3mo ago
LanguagePython

Fields of citing research

  • Medicine97%
  • Computer Science91%
  • Engineering53%
  • Physics2%
  • Biology2%
  • Materials Science2%
  • Mathematics1%
  • Linguistics1%

Share of papers citing this model.

Openness

bio.rodeo opennessClosed · low usability and reproducibility
21Closed
Usability — can I run it?14
Reproducibility — can I retrain it?13
Model Openness Framework
Unclassified
Restrictive license on core components

Tags

classificationfoundation_modelimage_restorationsegmentationself_supervisedultrasoundvision_transformer

Resources

GitHub RepositoryResearch PaperOfficial Website