All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 110 of 10 filtered models

  • CryoDiff

    Shandong UniversityJune 6, 2026cryo_emdiffusiongenerative+2

    Uncertainty-aware diffusion model that enhances cryo-EM density maps while estimating voxel-wise confidence via Monte Carlo sampling.

    Imaging
    20Openness
  • Universidad Carlos III de MadridJanuary 22, 2026cnncryo_emdenoising+5

    Bioimage restoration model pairing a NAFNet backbone with a perceptual GAN loss, best on LPIPS in 7 of 8 AI4Life microscopy benchmarks.

    Imaging
    16Openness
  • MAGNET

    Huazhong University of Science and TechnologyDecember 25, 2025denoisingfluorescence_microscopyfoundation_model+7

    Microscopy image restoration foundation model unifying 8 tasks across 5 modalities and 2D/3D data, with zero-shot inference on unseen systems.

    Imaging
    7Openness
  • Huazhong University of Science and TechnologySeptember 3, 2025cryo_emcryo_etimage_restoration+4

    Cryo-EM and cryo-ET map enhancement model that sharpens density maps with a Mamba-based dual-branch UNet and local resolution-guided learning.

    Imaging
    54Openness
  • Cellpose 3

    2.3K385
    HHMI Janelia Research CampusFebruary 1, 2025cell_biologygeneralist_modelimage_restoration+2

    Generalist cell segmentation pairing the cyto3 super-generalist model with one-click networks that denoise, deblur, and upsample microscopy images.

    Imaging
    65Openness
  • BME-X

    6876
    University of North Carolina at Chapel HillDecember 5, 2024cnndenoisingfoundation_model+5

    Tissue-aware foundation model that restores brain MRI quality across motion correction, super-resolution, denoising, and harmonization.

    Imaging
    70Openness
  • CELL-Diff

    7
    Chan Zuckerberg InitiativeOctober 18, 2024cell_biologyde_novo_designdiffusion+7

    Diffusion model translating in both directions between protein sequences and fluorescence microscopy images to predict subcellular localization.

    Imaging
    87Openness
  • USFM

    350112
    Fudan UniversityAugust 1, 2024classificationfoundation_modelimage_restoration+4

    Ultrasound foundation model pretrained on over two million multi-organ images, transferring to segmentation, classification, and image enhancement.

    Imaging
    22Openness
  • UniFMIR

    7079
    Fudan UniversityApril 12, 2024denoisingfluorescence_microscopyfoundation_model+2

    Swin transformer foundation model for fluorescence microscopy image restoration, unifying denoising, super-resolution, and volumetric reconstruction.

    Imaging
    83Openness
  • pytorch_fnet

    162493
    Allen Institute for Cell ScienceSeptember 17, 2018cell_biologycnnimage_restoration+3

    3D convolutional network that predicts subcellular fluorescence labels from transmitted-light microscopy, enabling label-free imaging of living cells.

    Imaging
    26Openness