All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 1–24 of 113 filtered models
DaX
1——Pathology vision foundation model adapting DINOv3-style self-supervised learning to whole-slide histopathology across continuous magnifications and scales.
Pathology11OpennessSciCore-Omics
8—230A tri-modal foundation model unifying histology images, spatial transcriptomics, and biological language for zero-shot spatial biology and pathology reasoning.
PathologySpatial omics65OpennessGenBloom
3——Genetically aligned foundation model for blood smear cytology that links single white-blood-cell morphology to chromosomal aberrations and mutations for AML/APL diagnosis.
Pathology65Openness- Hong Kong University of Science and Technology +9 othersMay 25, 2026clinical_decision_supportfoundation_modellung_tissue+7
A subspecialty lung-pathology foundation model, fine-tuned from Virchow2 and prospectively validated across 32 clinical tasks spanning the lung diagnostic workflow.
Pathology5Openness A domain-specific foundation model for zero-shot plant root image segmentation, built on a MobileSAM backbone and trained across nine diverse root datasets.
Imaging74OpennessBRIDGE
———The University of Hong KongMay 8, 2026contrastive_learningfoundation_modelgene_expression_prediction+8A multi-organ foundation model aligning histology image features with spatial-transcriptomics gene expression across 13 organs for zero-shot virtual ST and survival prediction.
PathologySpatial omics31OpennessBrainDINO
2——Emory University +2 othersApril 30, 2026brain_age_estimationdisease_classificationfoundation_model+6A self-supervised DINOv3-based foundation model for brain MRI, pretrained on ~6.6M unlabeled axial slices and transferable to diverse neuroimaging tasks.
Imaging49OpennessH2O
———Tencent AI for Life Science Lab +2 othersApril 24, 2026contrastive_learningfoundation_modelgene_expression+6A foundation model that predicts spatial transcriptomics and proteomics directly from routine H&E whole-slide images using a vision transformer aligned with a language model.
PathologySpatial omics7OpennessGenoJEPA
———Beijing University of Posts and TelecommunicationsApril 6, 2026foundation_modelgenomicsrepresentation_learning+4A genomic foundation model that learns DNA representations through joint-embedding prediction in latent space rather than nucleotide reconstruction.
DNA & Gene22OpennessHalo
———A pretrained whole-cell segmentation model for spatial transcriptomics that fuses DAPI nuclear images with RNA transcript density to recover cell boundaries.
Spatial omics63OpennessDigepath
———Subspecialty-specific computational pathology foundation model pretrained on 353 million multi-scale patches from 210,000 H&E slides for gastrointestinal pathology, achieving SOTA on 32 of 33 systematic downstream tasks.
Pathology15OpennessGenBio-PathFM
3423171.1B-parameter histopathology foundation model trained on public data with a JEDI (JEPA+DINO) dual-stage strategy, reaching state-of-the-art on THUNDER, HEST, and PathoROB.
Pathology21OpennessUNIStainNet
4——Foundation-model-guided virtual staining that generates four IHC markers (HER2, Ki67, ER, PR) from H&E using a single SPADE-UNet conditioned on a frozen UNI encoder.
Pathology17OpennessmnDINO
———A DINO-pretrained vision transformer for accurate, robust segmentation of micronuclei in DNA-stained fluorescence microscopy across cell lines and instruments.
Imaging32OpennessA self-supervised, cell-centric pretraining strategy that distills morphology and microenvironment views of each cell into a unified embedding for virtual spatial omics from microscopy.
Spatial omicsImagingPathology15OpennessOpticalDNA
———An OCR-inspired vision-language model that renders DNA as visual layouts to analyze long genomic sequences with far fewer tokens than sequential tokenizers.
DNA & Gene16OpennessEchoJEPA
3133—A Joint-Embedding Predictive foundation model for echocardiography, pretrained on 18M cardiac ultrasound videos to learn artifact-robust anatomical representations.
Imaging62OpennessSpatialDINO
—1—A native 3D vision transformer self-supervised on unlabeled fluorescence microscopy volumes that generalizes to unseen object classes without retraining or voxel annotations.
Imaging8OpennessNeuroVFM
204—University of Michigan +1 otherNovember 23, 2025ctfoundation_modeljoint_embedding_predictive_architecture+8A generalist neuroimaging vision foundation model pretrained on 5.24M clinical MRI and CT volumes for radiologic diagnosis and report generation.
Imaging57OpennessGPFM
12637—Hong Kong University of Science and Technology +3 othersNovember 1, 2025cancer_diagnosisfeature_extractionfoundation_model+8A generalizable computational-pathology foundation model trained on ~190M histopathology patches via unified knowledge distillation from UNI, Phikon, and CONCH.
Pathology84OpennessMIMO
1223—A medical vision-language model that accepts visual-referring multimodal input and produces pixel-grounded multimodal output, jointly answering and segmenting medical images.
ImagingLanguage model11OpennessDenseFormer-MoE
—24—A self-supervised foundation model for structural brain MRI combining DenseNet and Vision Transformer with Mixture of Experts for multi-task brain disease diagnosis and brain age prediction.
Imaging8Openness