Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 1–11 of 11 filtered models
Autoregressive generative model that uses reinforcement learning to optimize mRNA codon sequences for MFE, CAI, and GC content.
Protein binder generator producing receptor-conditioned binders from sequence alone, using a sparse Mixture-of-Experts transformer with no 3D input.
Generative microscopy foundation model that synthesizes in-silico fluorescence images of protein subcellular localization from amino-acid sequence.
Autoregressive generative model for protein molecular dynamics that emits flexible-length trajectories frame by frame with anti-drifting sampling.
Protein language model that encodes sequences as discrete words from a learned vocabulary for zero-shot function inference and protein design.
Family of autoregressive genomic foundation models that reconcile k-mer tokenization with single-nucleotide resolution at contexts up to 98k bp.
Protein dynamics model that samples conformational ensembles autoregressively at slow and fast timescales, generalizing zero-shot to unseen proteins.
Protein conformation and dynamics generation from MD data, sampling trajectories, independent ensembles, and interpolations between two known states.
Autoregressive 3D structure model built on an octree tokenizer, spanning molecule generation, molecular docking, and protein pocket prediction.
Long-context generative genomic foundation model with a 98k-nucleotide window, trained on 386 billion bases of eukaryotic DNA for sequence design.
Target-conditioned peptide binder design model that samples hot-spot residues from an energy-based density, then extends fragments autoregressively.