Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 1–24 of the 96 closest matches
Self-supervised vision foundation model for structural brain MRI, providing a reusable encoder for brain age, survival, and image classification.
Single-cell multiomic foundation model that transfers pan-cancer RNA-ATAC regulatory structure into RNA-only tumour datasets via low-rank adapters.
Cryo-ET tilt-series classifier that flags and removes tilts corrupted by drift, contamination, ice reflections, lamella edges, or thick lamellae.
Radiology-specific multimodal LLM that generates the findings section of a chest X-ray report from a frontal image, pairing RAD-DINO with Vicuna-7B.
Single-cell model inferring which developmental signaling pathways are active from scRNA-seq, trained on combinatorial stem-cell perturbation screens.
Foundation model for 3D genome architecture, using masked locus modeling over genome-wide contact profiles to capture chromosome-scale organization.
De novo peptide design across non-canonical amino acid space, using guided diffusion over receptor-ligand interfaces to reach D-amino acid chemistry.
Reference-guided anatomical segmentation for medical images, pairing vision-language spatial reasoning with a co-trained SAM 2 mask decoder.
Medical vision-language pretraining framework that injects structured medical knowledge into radiology image-text learning for VQA and retrieval.
Structure-based virtual screening model that scores ligands against apo and predicted pockets, lifting blind-apo EF1% on DUD-E from 11.75 to 37.19.
Spatial gene expression prediction from H&E histology that decodes raw integer counts coarse to fine instead of regressing log-transformed values.
Retrieval-augmented latent diffusion model for protein binder design, retrieving interfaces in a shared latent space across peptides and antibodies.
Geometric deep learning model that learns atomic-scale representations of molecular interfaces across proteins, small molecules, and nucleic acids.
PROTAC degradation prediction from molecular graphs of the target, linker, and E3 ligase, combining cross-attention with contrastive learning.
Atomic protein model building from cryo-EM density maps, resolving conformational heterogeneity through atom-centric sampling and diffusion.
Autoregressive generative model for protein molecular dynamics that emits flexible-length trajectories frame by frame with anti-drifting sampling.
Infers gene-centered chromatin interactions from bulk RNA-seq alone, mapping 3D genome changes across 12,347 tumor and normal transcriptomes.
Transformer foundation model for single-cell ATAC-seq that embeds both cells and cis-regulatory elements for annotation and batch correction.
Base-pair resolution sequence-to-activity CNN predicting ATAC-seq Tn5 insertion profiles and accessibility across 90 mouse immune cell types.
Autoregressive 3D structure model built on an octree tokenizer, spanning molecule generation, molecular docking, and protein pocket prediction.
Brain MRI foundation model family pretrained with anatomically informed contrastive learning for diagnosis and clinical score prediction.
Microsoft Research multimodal LLM for grounded chest X-ray report generation, localizing each described finding with bounding boxes on the image.