All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 169192 of 209 filtered models

  • ProTrek

    2102441
    Westlake UniversityJune 1, 2024contrastive_learningfoundation_modelmultimodal+1

    Tri-modal protein language model aligning sequence, structure, and text in one embedding space for natural-language search over billions of proteins.

    Protein
    66Openness
  • MULAN

    251047
    Skolkovo Institute of Science and TechnologyMay 30, 2024fine_tunedmultimodalproperty_prediction+4

    Multimodal protein language model extending ESM-2 and SaProt with a Structure Adapter over residue torsion angles for protein function prediction.

    Protein
    83Openness
  • Rice UniversityMay 26, 2024arrhythmia_detectioncontrastive_learningconvnext+6

    ECG foundation model that learns 12-lead waveform representations by contrastively aligning each recording with machine-generated cardiological text.

    Biosignals
    63Openness
  • Mammo-CLIP

    9845
    Boston University +1 otherMay 20, 2024bertbreast_cancercancer_detection+8

    Vision-language foundation model pre-trained on screening mammogram-report pairs to improve data efficiency and robustness in breast cancer detection.

    ImagingPathology
    27Openness
  • EyeFound

    43
    The Hong Kong Polytechnic University +3 othersMay 18, 2024disease_diagnosisfoundation_modelmasked_autoencoder+7

    Ophthalmic imaging foundation model pretrained on 2.78M images across 11 modalities for diagnosis, prognosis, and visual question answering.

    Imaging
    4Openness
  • MoME

    3125
    Beijing Institute of Technology +3 othersMay 16, 2024brain_mricnncurriculum_learning+7

    Universal brain lesion segmentation for multi-modal brain MRI, using a Mixture of Modality Experts to span diverse modalities and lesion types.

    Imaging
    79Openness
  • AlphaFold 3

    8.3K12.5K
    Google DeepMindMay 8, 2024multimodalprotein_designstructure_prediction

    Diffusion-based structure prediction model for biomolecular complexes, spanning proteins with DNA, RNA, small molecules, ions, and modified residues.

    Protein
    28Openness
  • EchoCLIP

    51218
    Cedars-Sinai Medical Center +2 othersMay 6, 2024cardiac_ultrasoundcontrastive_learningconvnext+7

    CLIP-style vision-language model for echocardiography, pretrained on echo videos and cardiologist reports for zero-shot cardiac interpretation.

    Imaging
    32Openness
  • ChatNT

    901538
    InstaDeep +1 otherApril 30, 2024gene_expressiongenomicsinstruction_tuning+3

    Conversational agent that answers plain-language questions about DNA, RNA, and protein sequences by coupling a genomics encoder to a language model.

    DNA & GeneLanguage model
    32Openness
  • Med-Gemini

    410
    Google Research +1 otherApril 29, 2024clinical_reasoningelectronic_health_recordsfine_tuning+9

    Family of medical multimodal models built on Gemini, adding uncertainty-guided web search, custom modality encoders, and long-context EHR reasoning.

    Language modelImaging
    8Openness
  • MedDr

    1002846
    Hong Kong University of Science and TechnologyApril 23, 2024foundation_modelhistologyinstruction_tuning+7

    Generalist medical vision-language foundation model with 40B parameters, spanning radiology, pathology, dermatology, retinography, and endoscopy.

    ImagingLanguage model
    69Openness
  • Med-MoE

    15889
    Zhejiang University +2 othersApril 16, 2024histologyimage_classificationinstruction_tuning+5

    Lightweight mixture-of-experts medical vision-language model routing visual question answering and image classification to domain-specific experts.

    ImagingLanguage modelPathology
    81Openness
  • M3D

    454172924
    Beijing Academy of Artificial IntelligenceMarch 31, 2024ctimage_text_retrievalinstruction_tuning+9

    Multimodal large language model for 3D medical imaging that handles report generation, visual question answering, and segmentation on CT volumes.

    ImagingLanguage model
    77Openness
  • Baker LabMarch 7, 2024multimodalprotein_designsmall_molecule+1

    Deep network that predicts structures of full biological assemblies: proteins, nucleic acids, small molecules, metals, and covalent modifications.

    Protein
    54Openness
  • CheXagent

    23075981
    Stanford UniversityJanuary 22, 2024chest_x_rayfoundation_modelimage_classification+7

    Instruction-tuned vision-language foundation model for chest X-ray interpretation, with 8 billion parameters spanning eight clinical task types.

    ImagingLanguage model
    32Openness
  • BioCLIP

    27024124.8K
    Imageomics InstituteNovember 30, 2023biodiversitycontrastive_learningfoundation_model+5

    Vision foundation model for the tree of life, trained on TreeOfLife-10M for zero-shot species classification of plants, animals, and fungi.

    Imaging
    93Openness
  • MAIRA-1

    92
    Microsoft ResearchNovember 22, 2023chest_x_raymultimodalmultimodal_transformer+4

    Radiology-specific multimodal LLM that generates the findings section of a chest X-ray report from a frontal image, pairing RAD-DINO with Vicuna-7B.

    ImagingLanguage model
    6Openness
  • SegVol

    386122747
    Beijing Academy of Artificial IntelligenceNovember 22, 2023ctfoundation_modelmultimodal+4

    Promptable 3D foundation model for volumetric CT segmentation, covering over 200 anatomical categories through point, box, and free-text prompts.

    Imaging
    100Openness
  • Alibaba GroupOctober 27, 2023histologyinstruction_tuningmultimodal+4

    Chinese medical vision-language model pairing a Vision Transformer with an LLM to caption medical images and answer clinical questions in Chinese.

    Language modelPathology
    44Openness
  • CXR-LLaVA

    5439180
    Seoul National University +1 otherOctober 22, 2023abnormality_classificationchest_x_rayinstruction_tuning+6

    Chest X-ray vision-language model that generates free-text radiology reports, pairing a CXR-specific image encoder with a 7B LLaMA-2 language model.

    ImagingLanguage model
    27Openness
  • CXR-CLIP

    123138
    Kakao BrainOctober 20, 2023bertchest_x_raycnn+8

    Large-scale chest X-ray vision-language pretraining model that learns image-report alignment for zero-shot and few-shot radiograph classification.

    Imaging
    18Openness
  • City University of Hong Kong +2 othersOctober 1, 2023cnnct_imagingmultimodal+6

    Abdominal CT segmentation model driven by CLIP text embeddings, covering 25 organs and 6 tumor types with zero-shot extension to new categories.

    Imaging
    26Openness
  • UniBrain

    39183
    Shanghai Jiao Tong University +3 othersSeptember 13, 2023brain_mricnncontrastive_learning+6

    Vision-language pre-training framework for universal brain MRI diagnosis, learning from imaging-report pairs to cover more than ten brain diseases.

    Imaging
    35Openness
  • RadFM

    561263
    Shanghai Jiao Tong University +1 otherAugust 4, 2023disease_diagnosisfoundation_modelgenerative+7

    Radiology foundation model that reads interleaved 2D and 3D scans with text for diagnosis, visual question answering, and report generation.

    ImagingLanguage model
    84Openness