All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 121–144 of 158 filtered models
M3FM
1938—Multimodal medical imaging foundation model for zero-shot clinical diagnosis and report generation from chest X-ray and CT in English and Chinese.
ImagingLanguage model60OpennessECG-LM
—42—Multimodal ECG language model pairing a specialized signal encoder with a biomedical LLM for cardiovascular disease detection and question answering.
BiosignalsLanguage model24OpennessTrASPr
—13—Multi-transformer model that predicts tissue-specific alternative splicing outcomes and generalizes zero-shot to unseen cellular conditions.
RNA33OpennessBrainfound
—4—Tsinghua University +2 othersJanuary 10, 2025contrastive_learningcross_modality_translationdiffusion+9Multimodal vision-text foundation model for brain CT and MRI, pretrained on roughly 10 million image-report pairs to act as a clinical copilot.
ImagingLanguage model7OpennessMUSK
240283—Vision-language foundation model for precision oncology, pretrained on 50M pathology images and 1B text tokens via unified masked modeling.
PathologyLanguage model12OpennessSABER
18——Cryo-ET segmentation framework adapting SAM2 to vesicles and membrane-bound compartments in tomograms and 2D micrographs, zero-shot or fine-tuned.
Imaging78OpennessProCyon
6013—Multimodal foundation model integrating protein sequence, structure, and natural language to model and generate protein phenotypes across scales.
ProteinLanguage modelSmall molecule83OpennessEvo
1.5K2501.8KGenomic foundation model with 7B parameters that models prokaryotic DNA, RNA, and protein at single-nucleotide resolution over a 131k-token context.
DNA & Gene70OpennessLOL-EVE
238Conditional autoregressive genomic language model trained on 13.6M mammalian promoters, scoring promoter variants, including indels, zero-shot.
DNA & Gene89OpennessNatureLM-audio
99551.9KAudio-language foundation model for bioacoustics that answers natural-language questions about animal sounds, with zero-shot species classification.
BiosignalsLanguage model61OpennessDeepCell Types
910—Cell phenotyping model for spatial proteomics using a language-informed vision transformer to classify cell types zero-shot across marker panels.
ImagingSpatial omics33OpennessSeqDance / ESMDance
61880Protein language models trained on biophysical dynamics from MD simulations and normal-mode analysis; ESMDance builds on ESM2 for variant effects.
Protein84OpennessTUMSyn
4526—Text-guided MRI synthesis model that generates brain MR sequences and resolutions on demand from routine scans using imaging-metadata prompts.
Imaging28OpennessMedical SAM 2
933257—SAM2-based foundation model that segments 2D and 3D medical images by treating volumes and image sets as video object tracking.
Imaging74OpennessScribblePrompt
22066—Interactive foundation model for biomedical image segmentation, prompted with scribbles, clicks, and bounding boxes to segment unseen structures.
Imaging63OpennessCONCH
5181K67.1KHistopathology vision-language foundation model pretrained on 1.17 million image-caption pairs with contrastive and captioning objectives.
Imaging44OpennessuniGradICON
22871—Foundation model for medical image registration that aligns CT and MRI across anatomies and modalities without per-pair optimization or retraining.
Imaging65OpennessBrainMass
2557—Self-supervised foundation model for functional brain network analysis from resting-state fMRI, pretrained across 30 datasets for disorder diagnosis.
Biosignals18OpennessMedSAM
4.4K1.5K1.8KPromptable foundation model for universal medical image segmentation, fine-tuned from SAM on 1.57M image-mask pairs across 10 imaging modalities.
Imaging82OpennessSelf-supervised foundation models for wearable PPG and ECG signals, trained with contrastive learning on Apple Heart and Movement Study recordings.
Biosignals5OpennessT3D
—16—Vision-language pretraining for 3D CT volumes, aligning scans with their radiology reports for zero-shot classification, retrieval, and segmentation.
ImagingLanguage model12OpennessBioCLIP
27024124.8KVision foundation model for the tree of life, trained on TreeOfLife-10M for zero-shot species classification of plants, animals, and fungi.
Imaging93Openness