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Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 121–144 of 2565 models
Drug- and dose-conditioned latent transition predictor pretrained on the Tahoe-100M perturbation atlas and transferred frozen to tumor RNA-seq.
Cryo-EM pose estimation conditioned on a reference volume handed in at inference, assigning particle orientations zero-shot on unseen structures.
Protein-ligand co-folding model on the OpenFold3 architecture, trained on PDB structures through June 2025 with inference-time chemical steering.
Bioacoustic encoder for birdsong that resolves individual syllables at 5 ms, using asymmetric spectrogram patches and Voronoi masked pretraining.
Accelerated MRI reconstruction that plugs a pretrained consistency-model prior into regularization by denoising, using four network evaluations.
RNA co-design model generating sequence and 3D backbone together, with SE(3) flow matching over coupled base-centered and sugar-centered frames.
Gene regulatory network inference from scRNA-seq that returns directed TF-to-target edges in one forward pass, with no per-dataset refitting.
Variant effect and disease phosphosite prediction that fuses frozen ESM-2 embeddings with normal-mode protein dynamics over AlphaFold residue graphs.
Binary protein classification over frozen ESM3 embeddings, using transformer contextualization and learned attention pooling instead of fixed pooling.
Self-supervised transformer fusing Enformer DNA embeddings with ATAC-seq accessibility into reusable 256-dimensional genomic window embeddings.
Long-context co-folding model for protein, nucleic-acid and ligand assemblies, folding systems up to 16,384 residues on a single GPU.
Cross-modal continued pretraining on curated mass-spectrometry proteomes lifts a 70M single-cell model past RNA-only checkpoints far larger.
Self-supervised transformer pretrained on cell-free RNA expression profiles, built as a shared substrate for downstream disease-detection models.
Normative foundation model for structural brain MRI that scores how far each of 218 anatomical parcels departs from healthy aging.
Designs RNA and DNA aptamers against protein targets by backpropagating binding and anti-binding objectives through a frozen all-atom predictor.
World model that simulates a human cell as one persistent state, propagating drug and gene perturbations from DNA through to whole-cell morphology.
Cardiac SPECT attenuation correction that turns non-corrected myocardial perfusion scans into corrected images without any CT input at inference.
Histopathology tile encoders reach 22M parameters by distilling billion-parameter teachers through their frozen class and patch tokens alone.
Pan-cancer clinico-genomic model for treatment response and survival prediction, transferring zero-shot to unseen hospitals and cancer types.
Transformer U-Net pretrained on 6 trillion tokens of multi-species DNA, predicting expression and epigenomic tracks across 1 Mb of context.
Histopathology foundation model for uterine malignancies that orders whole-slide morphology into continuous, progression-associated tumor states.