All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 73–96 of 141 filtered models
BiMediX2
742120Mohamed bin Zayed University of Artificial IntelligenceDecember 10, 2024histologyinstruction_tuninglanguage_model+7Bilingual Arabic-English medical multimodal model built on Llama 3.1 for radiology, CT, and histology image understanding and question answering.
Language modelImagingPathology11OpennessSubCell
612—Chan Zuckerberg Initiative +2 othersDecember 8, 2024cell_biologyfluorescence_microscopyfoundation_model+3Vision transformers trained on Human Protein Atlas fluorescence microscopy for subcellular protein localization and cell morphology representation.
Imaging84OpennessBrainIAC
13924—Self-supervised vision foundation model for structural brain MRI, providing a reusable encoder for brain age, survival, and image classification.
Imaging24OpennessTITAN
357218118.2KSlide-level pathology foundation model turning whole-slide images into reusable embeddings for classification, retrieval, and report generation.
Pathology21OpennessUltraSam
13633—Promptable ultrasound image segmentation foundation model, a SAM adaptation trained on US-43d, the largest public ultrasound segmentation corpus.
Imaging26OpennessOpenPhenom-S/16
78888.9KCell Painting microscopy foundation model, a channel-agnostic masked autoencoder producing morphological embeddings for zero-shot phenotypic analysis.
Imaging26OpennessCryo-IEF
73——Cryo-EM foundation model pre-trained on 65 million particle images, enabling zero-shot classification, pose clustering, and quality assessment.
Imaging42OpennessDeepCell Types
910—Cell phenotyping model for spatial proteomics using a language-informed vision transformer to classify cell types zero-shot across marker panels.
ImagingSpatial omics33OpennessSS-CXR
—13—Children's National Hospital +2 othersOctober 27, 2024disease_classificationfoundation_modelradiology+3Self-supervised vision transformer pretrained on chest X-rays to produce a domain-specific foundation model for classification and lung segmentation.
Imaging22OpennessMedRegA
462913Hong Kong University of Science and Technology +1 otherOctober 24, 2024histologyimage_classificationinstruction_tuning+8Region-aware bilingual medical multimodal LLM that handles image- and region-level vision-language tasks across eight imaging modalities.
PathologyLanguage model65OpennessPULSE
67301.9KMultimodal large language model that interprets 12-lead electrocardiogram images, answering open-ended clinical questions and generating ECG reports.
BiosignalsImaging84OpennessgCIS
109—CT segmentation foundation model that uses task prompts to segment 83 anatomical structures and lesions across whole-body scans in a single network.
Imaging14OpennessECG-JEPA
1617—Joint-embedding predictive foundation model pretrained on over a million unlabeled ECGs, learning transferable 12-lead representations for diagnosis.
Biosignals62OpennessBrain-JEPA
17479—Brain-dynamics foundation model for resting-state fMRI, adapting the Joint-Embedding Predictive Architecture with brain gradient positioning.
BiosignalsImaging18OpennessTUMSyn
4526—Text-guided MRI synthesis model that generates brain MR sequences and resolutions on demand from routine scans using imaging-metadata prompts.
Imaging28OpennessCHIEF
715545—Weakly supervised histopathology foundation model pretrained on 60,530 whole-slide images for cancer detection, prognosis, and molecular prediction.
Pathology15OpennessMaCo
1276—Chest X-ray foundation model that pairs masked image modeling with image-report contrastive alignment for zero-shot diagnosis and phrase grounding.
Imaging74OpennessLLaVA-Tri
412944Medical vision-language model trained on the MedTrinity-25M dataset, answering questions and generating text about radiology and histology images.
Language modelPathology30OpennessMedical SAM 2
933257—SAM2-based foundation model that segments 2D and 3D medical images by treating volumes and image sets as video object tracking.
Imaging74OpennessUSFM
350112—Ultrasound foundation model pretrained on over two million multi-organ images, transferring to segmentation, classification, and image enhancement.
Imaging22OpennessScribblePrompt
22066—Interactive foundation model for biomedical image segmentation, prompted with scribbles, clicks, and bounding boxes to segment unseen structures.
Imaging63OpennessPathChat
—478—Multimodal vision-language copilot for pathology that answers open-ended questions about histology images and reasons about differential diagnoses.
PathologyLanguage model35OpennessCryoViT
125—Semi-supervised cryo-ET segmentation framework that adapts DINOv2 vision transformers for 3D organelle annotation using sparse 2D slice labels.
Imaging45OpennessHuatuoGPT-Vision
3992042.8KShenzhen Research Institute of Big Data +1 otherJune 27, 2024histologyinstruction_tuningmedical_image_understanding+5Open medical multimodal LLMs (7B and 34B) for visual question answering over radiology, pathology, and endoscopy images, trained on PubMedVision.
PathologyLanguage model52Openness