Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 49–62 of 62 filtered models
Receptor activity inference from bulk or single-cell transcriptomes, reading the genes a receptor regulates instead of the receptor's own expression.
Single-cell transcriptomic aging clock predicting immune age for CD8+, CD4+ T and NK cells, and transferring to bulk whole-blood RNA-seq.
Spot detection and quantification in 5D fluorescence microscopy. Pretrained 2D and 3D U-Nets segment foci, then Gaussian fitting measures each one.
Convolutional ECG foundation model trained on expert annotations spanning 150 diagnostic categories, with 12-lead and single-lead wearable variants.
Perturbation target identification for single-cell transcriptomics, reading intervened genes off the difference between two inferred causal graphs.
Protein language models pretrained on Rosetta biophysics simulations rather than evolutionary data, then finetuned on small experimental assays.
Spot detection for single-molecule RNA FISH and fluorescence microscopy, trained on a differentiable F1 approximation, needing no threshold tuning.
Scalable and transferable U-Net family (14M–1.4B parameters) for 3D medical image segmentation, supervised-pretrained on TotalSegmentator.
Brain MRI segmentation network with progressive levels of detail, trained across ~160 acquisition sites so one checkpoint handles unseen scanners.
Residue-level binding site prediction from a bare protein sequence, ensembling six neural nets over protein, DNA/RNA and small-molecule interfaces.
Per-residue AlphaFold2 pLDDT confidence regressed from sequence by a bidirectional LSTM, with no structure prediction and no database lookup.
Pretrained 3D-ResNet backbones for volumetric medical image analysis, co-trained across eight CT and MRI segmentation datasets for transfer learning.