All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 4972 of 105 filtered models

  • McGill University +1 otherSeptember 12, 2025brain_mricnncontrastive_learning+7

    Self-supervised foundation model for 3D brain MRI, learning transferable anatomical representations from unlabeled scans for disease classification.

    Imaging
    74Openness
  • CLASP

    44
    McGill UniversityAugust 10, 2025contrastive_learningcross_modal_retrievalgraph_neural_network+7

    Tri-modal contrastive model aligning protein structure, sequence, and text in a shared space for zero-shot cross-modal retrieval and classification.

    Protein
    42Openness
  • MedSigLIP

    29837421K
    Google Research +1 otherJuly 9, 2025contrastive_learningembeddingsfoundation_model+7

    Medically tuned SigLIP encoder from Google that maps medical images and text into one embedding space for zero-shot classification and retrieval.

    ImagingPathology
    30Openness
  • MELP

    311818
    The University of Hong KongJune 27, 2025contrastive_learningecg_classificationelectrocardiogram+4

    Multi-scale ECG-language model that aligns 12-lead ECG signals with clinical text at token, beat, and rhythm levels for zero-shot cardiac diagnosis.

    BiosignalsLanguage model
    68Openness
  • EyeCLIP

    8765
    The Hong Kong Polytechnic University +5 othersJune 21, 2025clipcontrastive_learningcross_modal_retrieval+11

    CLIP-based vision-language foundation model for eye imaging, enabling zero-shot disease detection and cross-modal retrieval across 11 modalities.

    ImagingLanguage model
    15Openness
  • SensorLM

    58
    Google Research +2 othersJune 10, 2025activity_recognitioncontrastive_learningcross_modal_retrieval+6

    Sensor-language foundation models aligning wearable biosignals with text for zero-shot activity recognition, retrieval, and sensor captioning.

    BiosignalsLanguage model
    41Openness
  • BioCLIP 2

    774348.7K
    Imageomics InstituteMay 29, 2025biodiversitycontrastive_learningfoundation_model+6

    Vision foundation model for the tree of life, trained on 214 million organism images across 952,000 taxa for zero-shot species classification.

    Imaging
    93Openness
  • SpatialEx

    38
    Jilin University +1 otherFebruary 23, 2025contrastive_learningfoundation_modelgene_expression_prediction+6

    Histology-anchored framework pairing an H&E foundation model with a cellular hypergraph to predict single-cell multi-omics from tissue images.

    Spatial omicsPathology
    57Openness
  • FetalCLIP

    7022
    Mohamed bin Zayed University of Artificial Intelligence +1 otherFebruary 20, 2025classificationcontrastive_learningfoundation_model+7

    Vision-language foundation model for fetal ultrasound, pretrained on 210,035 image-text pairs for plane classification, biometry, and segmentation.

    Imaging
    13Openness
  • M3FM

    1938
    University of Oxford +6 othersFebruary 6, 2025chest_x_rayclipcontrastive_learning+9

    Multimodal medical imaging foundation model for zero-shot clinical diagnosis and report generation from chest X-ray and CT in English and Chinese.

    ImagingLanguage model
    60Openness
  • Pulse-PPG

    7345
    University of Memphis +1 otherFebruary 3, 2025cnncontrastive_learningfoundation_model+5

    Photoplethysmography foundation model pretrained on raw wearable signals from a field study, transferring across lab and field health tasks.

    Biosignals
    64Openness
  • Brainfound

    4
    Tsinghua University +2 othersJanuary 10, 2025contrastive_learningcross_modality_translationdiffusion+9

    Multimodal vision-text foundation model for brain CT and MRI, pretrained on roughly 10 million image-report pairs to act as a clinical copilot.

    ImagingLanguage model
    7Openness
  • ProteinDT

    107106
    UC BerkeleyJanuary 1, 2025contrastive_learningdrug_discoveryfoundation_model+1

    Text-guided protein design framework aligning language with sequences for text-conditioned generation, zero-shot editing, and property prediction.

    Protein
    52Openness
  • ECGFM-KED

    4352
    Shanghai Jiao Tong UniversityDecember 18, 2024cardiologycnncontrastive_learning+7

    Knowledge-enhanced ECG foundation model aligning a ResNet encoder with LLM-generated disease descriptions for zero- and few-shot interpretation.

    Biosignals
    30Openness
  • BrainIAC

    13924
    Mass General Brigham +4 othersDecember 2, 2024brain_age_predictionbrain_mricontrastive_learning+7

    Self-supervised vision foundation model for structural brain MRI, providing a reusable encoder for brain age, survival, and image classification.

    Imaging
    24Openness
  • RelCon

    3430
    Apple +2 othersNovember 27, 2024activity_recognitioncnncontrastive_learning+4

    Motion foundation model for wearable accelerometry, trained with relative contrastive learning on 1B segments from 87,376 participants.

    Biosignals
    48Openness
  • SCimilarity

    258125
    GenentechNovember 20, 2024autoencodercell_type_annotationcontrastive_learning+3

    Single-cell foundation model trained by metric learning to embed scRNA-seq profiles for cell type annotation and similarity search in cell atlases.

    Single-cell
    78Openness
  • Cryo-IEF

    73
    Westlake UniversityNovember 6, 2024contrastive_learningcryo_emfoundation_model+3

    Cryo-EM foundation model pre-trained on 65 million particle images, enabling zero-shot classification, pose clustering, and quality assessment.

    Imaging
    42Openness
  • DynaCLR

    1023
    Chan Zuckerberg InitiativeOctober 15, 2024cell_biologycell_state_classificationcnn+5

    Self-supervised contrastive model embedding cell and organelle dynamics from time-lapse microscopy for cell-state analysis without manual labels.

    Imaging
    71Openness
  • Orthrus

    1291819.9K
    Bowang LabOctober 12, 2024contrastive_learningfoundation_modelrna_structure+1

    Mamba-based mature RNA foundation model, contrastively trained on splice isoforms and 400+ mammalian species orthologs for mRNA property prediction.

    RNA
    71Openness
  • D-BETA

    3613120
    Singapore Management University +1 otherOctober 3, 2024autoencodercontrastive_learningecg_classification+6

    ECG foundation model pretrained on 12-lead waveforms paired with clinical reports, enabling label-efficient and zero-shot cardiac diagnosis.

    BiosignalsLanguage model
    27Openness
  • DFMDock

    557
    Johns Hopkins UniversitySeptember 27, 2024contrastive_learningdiffusiongenerative+3

    Diffusion model for protein-protein docking that unifies pose sampling and energy-based ranking, works without MSAs, and generalizes to new targets.

    Protein
    81Openness
  • TUMSyn

    4526
    ShanghaiTech University +2 othersSeptember 25, 2024cnncontrastive_learningfoundation_model+6

    Text-guided MRI synthesis model that generates brain MR sequences and resolutions on demand from routine scans using imaging-metadata prompts.

    Imaging
    28Openness
  • Charité – Universitätsmedizin BerlinSeptember 11, 2024clinical_phenotypingcontrastive_learningcross_modal_retrieval+5

    Multimodal contrastive model aligning clinical EEG with free-text reports, enabling zero-shot EEG classification from natural-language prompts.

    BiosignalsLanguage model
    26Openness