Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 145–168 of 221 filtered models
Vaccine literature-mining model that classifies Brucella vaccine abstracts and extracts antigen, formulation, platform, and animal-model fields.
Text-guided protein design that generates functional sequences from natural language prompts through a contrastive protein-text embedding space.
Audio-language foundation model for bioacoustics that answers natural-language questions about animal sounds, with zero-shot species classification.
Controllable protein sequence generator adapted from Llama-3-8B with LoRA, prompted in plain English to emit enzymes from ten property classes.
Compact protein sequence generator adapted from Phi-3-mini with LoRA, emitting enzymes for ten named property classes from a plain-English prompt.
Chemical language model generating SMILES on a recurrent xLSTM backbone, designing within an unseen molecular domain from a few in-context examples.
SMILES transformer pretrained to predict 113 RDKit molecular descriptors, giving embeddings that carry physicochemical properties into ADMET models.
Long-context protein language model on a bidirectional Mamba backbone, outperforming ESM-2 by up to 30% at matched training token budgets.
Protein language model that explains single-site mutation effects in natural language and proposes new mutants from free-text instructions.
Text-guided molecule generation by linking a pretrained scientific text encoder to a frozen molecular language model with a cross-attention adapter.
Region-aware bilingual medical multimodal LLM that handles image- and region-level vision-language tasks across eight imaging modalities.
Genomic sequence classification answered through natural-language prompts by one GPT-2 pretrained on mixed DNA and English under one BPE vocabulary.
Contrastive transcriptome-text model for free-text search, zero-shot cell annotation and natural-language chat over bulk and single-cell RNA-seq.
3D CT vision-language model that drafts radiology reports, answers questions about volumes, and screens for disease from a masked-autoencoder encoder.
Vision-language chat model for 3D chest CT volumes, answering free-form questions and drafting radiology report findings from a frozen 3D encoder.
Vision-language assistant that reads a whole gigapixel pathology slide, answering diagnostic questions and writing slide-level descriptions.
Joint embedding space for common SNPs and free-text clinical concepts, aligned by contrastive learning over GWAS, biobank and knowledge-graph pairs.
Chemical language model that translates IR, UV-Vis and 1H NMR spectra into SMILES structures, replacing the enumerate-and-filter CASE workflow.
Multimodal LLM aligning natural language, small molecules and proteins in any direction, turning prose design goals into molecules or enzymes.
Multi-modal protein foundation model aligning 3D structure and literature text to a sequence anchor through contrastive pretraining.
Multimodal LLM for inverse molecular design, interleaving text and graph generation with a diffusion transformer and A* retrosynthetic planning.