All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 73–96 of 168 filtered models
MINIM
158138—Text-to-image diffusion model that generates synthetic medical images across imaging modalities and organs to augment scarce clinical training data.
Imaging41OpennessEndoChat
514423Chinese University of Hong Kong +5 othersJanuary 20, 2025endoscopygrounded_dialogueinstruction_tuning+6Grounded multimodal language model for endoscopic surgery, supporting visual dialogue, region-based question answering, and bounding-box grounding.
ImagingLanguage model22OpennessMedicoSAM
319—Segment Anything Model finetuned on diverse medical images, giving a reusable promptable checkpoint for interactive and automatic image segmentation.
Imaging77OpennessBrainfound
—4—Tsinghua University +2 othersJanuary 10, 2025contrastive_learningcross_modality_translationdiffusion+9Multimodal vision-text foundation model for brain CT and MRI, pretrained on roughly 10 million image-report pairs to act as a clinical copilot.
ImagingLanguage model7OpennessCryoLens
19——Variational autoencoder that learns interpretable representations of protein subtomograms from cryo-ET, trained on 5.8 million synthetic particles.
Imaging74OpennessSABER
18——Cryo-ET segmentation framework adapting SAM2 to vesicles and membrane-bound compartments in tomograms and 2D micrographs, zero-shot or fine-tuned.
Imaging78OpennessOctopi
13——Cryo-ET particle picking model that localizes and classifies multiple protein complexes in a tomogram with a single 3D U-Net forward pass.
Imaging81OpennessBiMediX2
742120Mohamed bin Zayed University of Artificial IntelligenceDecember 10, 2024histologyinstruction_tuninglanguage_model+7Bilingual Arabic-English medical multimodal model built on Llama 3.1 for radiology, CT, and histology image understanding and question answering.
Language modelImagingPathology11OpennessSubCell
612—Chan Zuckerberg Initiative +2 othersDecember 8, 2024cell_biologyfluorescence_microscopyfoundation_model+3Vision transformers trained on Human Protein Atlas fluorescence microscopy for subcellular protein localization and cell morphology representation.
Imaging84OpennessBME-X
6876—Tissue-aware foundation model that restores brain MRI quality across motion correction, super-resolution, denoising, and harmonization.
Imaging70OpennessBrainIAC
13924—Self-supervised vision foundation model for structural brain MRI, providing a reusable encoder for brain age, survival, and image classification.
Imaging24OpennessUltraSam
13633—Promptable ultrasound image segmentation foundation model, a SAM adaptation trained on US-43d, the largest public ultrasound segmentation corpus.
Imaging26OpennessBiomedParse
686170548Biomedical imaging foundation model that segments, detects, and recognizes structures across nine modalities from natural language prompts.
Imaging60OpennessOpenPhenom-S/16
78888.9KCell Painting microscopy foundation model, a channel-agnostic masked autoencoder producing morphological embeddings for zero-shot phenotypic analysis.
Imaging26OpennessCryo-IEF
73——Cryo-EM foundation model pre-trained on 65 million particle images, enabling zero-shot classification, pose clustering, and quality assessment.
Imaging42OpennessDeepCell Types
910—Cell phenotyping model for spatial proteomics using a language-informed vision transformer to classify cell types zero-shot across marker panels.
ImagingSpatial omics33OpennessSpark3D (S3D)
1573936Masked-autoencoder foundation model that pre-trains a 3D Residual Encoder U-Net on roughly 39,000 brain MRIs for volumetric image segmentation.
Imaging45OpennessSS-CXR
—13—Children's National Hospital +2 othersOctober 27, 2024disease_classificationfoundation_modelradiology+3Self-supervised vision transformer pretrained on chest X-rays to produce a domain-specific foundation model for classification and lung segmentation.
Imaging22OpennessPULSE
67301.9KMultimodal large language model that interprets 12-lead electrocardiogram images, answering open-ended clinical questions and generating ECG reports.
BiosignalsImaging84OpennessCELL-Diff
7——Diffusion model translating in both directions between protein sequences and fluorescence microscopy images to predict subcellular localization.
Imaging87OpennessDynaCLR
1023—Self-supervised contrastive model embedding cell and organelle dynamics from time-lapse microscopy for cell-state analysis without manual labels.
Imaging71OpennessgCIS
109—CT segmentation foundation model that uses task prompts to segment 83 anatomical structures and lesions across whole-body scans in a single network.
Imaging14OpennessCryoFM
35722Generative foundation model for cryo-EM density maps using flow matching, enabling zero-shot denoising, map sharpening, and missing wedge restoration.
Imaging77Openness