All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 119 of 19 filtered models

  • Genos-m

    20177
    BGI-HangzhouAIMay 21, 2026foundation_modelgene_fitness_predictionmetagenomics+7

    A 4.7B-parameter Mixture-of-Experts genomic foundation model pretrained on ~1.2 trillion nucleotide tokens from human-associated microbial genomes.

    DNA & Gene
    73Openness
  • OmniGene-4

    Huazhong University of Science and TechnologyMay 12, 2026dnafoundation_modelinstruction_following+7

    A unified bio-language Mixture-of-Experts foundation model spanning DNA, protein sequence and structure, and biological text, applied across eight task families from a single checkpoint.

    Language modelDNA & GeneProtein
    7Openness
  • Zhejiang Lab +1 otherApril 21, 2026chromatinchromatin_accessibilitydna+8

    A 1.25B-parameter Mixture-of-Experts genomic foundation model for rice, pretrained on 422 Oryza genomes with a 1 Mbp context window.

    DNA & Gene
    90Openness
  • Suiren-1.0

    17
    Golab (SAIS Physics Lab)March 23, 2026diffusiondrug_discoveryfoundation_model+6

    A family of SE(3)-equivariant molecular foundation models pretrained on ~70M DFT conformers, reaching state of the art on TDC ADMET and MoleHB property-prediction benchmarks.

    Small molecule
    46Openness
  • AetherCell

    2
    Sun Yat-sen UniversityMarch 13, 2026drug_repurposingfoundation_modelgenerative+6

    Generative virtual-cell engine that unifies clinical RNA-seq and perturbation-assay data to predict transcriptomic responses to unseen compounds and genetic perturbations across biological scales.

    Single-cellSmall molecule
    17Openness
  • MoLF

    National Center for Tumor Diseases DresdenFebruary 2, 2026flow_matchinggene_expressiongenerative+5

    A pan-cancer generative model that predicts spatial gene expression from H&E histology using conditional flow matching with a mixture-of-experts velocity field.

    PathologySpatial omics
    9Openness
  • Gengram

    48
    Zhejiang LabJanuary 29, 2026dnafoundation_modelgenomics+5

    Retrieval-augmented genomic foundation model that adds an explicit hash-based k-mer motif memory to transformer backbones, gaining up to 14% on functional genomics tasks.

    DNA & Gene
    83Openness
  • GenoME

    Changping Laboratory +1 otherDecember 28, 2025chromatinepigenomicsfoundation_model+8

    A Mixture-of-Experts generative model that turns DNA sequence plus cell-type ATAC-seq into unified epigenomic, transcriptomic, and 3D chromatin profiles, generalizing to unseen cell types.

    DNA & GeneSingle-cell
    8Openness
  • vir2vec

    University of FloridaDecember 12, 2025embeddingsfoundation_modelgenomics+6

    A 422M-parameter pan-viral genomic language model that produces fixed genome-level embeddings reused across viral classification tasks without re-training.

    DNA & Gene
    53Openness
  • PlantBiMoE

    Huazhong University of Science and TechnologyDecember 8, 2025dnafoundation_modelgene_expression+6

    A lightweight plant genome foundation model pairing a bidirectional Mamba backbone with a sparse Mixture-of-Experts, pretrained on 25.4B nucleotides from 42 plant species.

    DNA & Gene
    53Openness
  • NeurIPT

    1111
    Xiamen University Malaysia +4 othersOctober 18, 2025brain_computer_interfaceseegeeg_decoding+8

    EEG foundation model for brain-computer interfaces, using amplitude-aware masked pretraining and a progressive mixture-of-experts transformer across diverse electrode setups.

    Biosignals
    11Openness
  • Shanghai Jiao Tong UniversityOctober 1, 2025brain_age_predictionbrain_mridensenet+8

    A self-supervised foundation model for structural brain MRI combining DenseNet and Vision Transformer with Mixture of Experts for multi-task brain disease diagnosis and brain age prediction.

    Imaging
    8Openness
  • ProGen3

    11147
    ProfluentApril 16, 2025de_novo_designfoundation_modelgenerative+6

    Sparse mixture-of-experts autoregressive protein language model family pretrained on 1.5 trillion amino acid tokens with compute-optimal scaling.

    Protein
    33Openness
  • MedPLIB

    130337
    Baidu +3 othersDecember 12, 2024histologymedical_image_groundingmixture_of_experts+8

    Biomedical multimodal LLM with pixel-level insight, combining visual question answering, pixel-grounded prompts, and segmentation via a mixture-of-experts design.

    ImagingLanguage model
    80Openness
  • AIDO.Protein

    16321774
    genbio.aiNovember 29, 2024foundation_modellanguage_modelmixture_of_experts+6

    A 16-billion-parameter mixture-of-experts protein language model pretrained on 1.2 trillion amino acids, the first MoE architecture applied to protein foundation modeling.

    Protein
    29Openness
  • PaPaGei

    16472
    Nokia Bell LabsOctober 27, 2024bias_evaluationcardiovascular_healthcnn+5

    The first open foundation model for photoplethysmography (PPG), pretrained on ~20M PPG segments with morphology-aware representation learning for cardiovascular and health tasks.

    Biosignals
    67Openness
  • MoME

    3124
    Beijing Institute of Technology +3 othersMay 16, 2024brain_mricnncurriculum_learning+7

    A universal foundation model for brain lesion segmentation on multi-modal brain MRI, using a Mixture of Modality Experts to handle diverse modalities and lesion types.

    Imaging
    79Openness
  • M4oE

    5441
    Hong Kong Baptist University +1 otherMay 15, 2024foundation_modelmedical_imagingmixture_of_experts+3

    A Mixture-of-Experts foundation model for medical multimodal image segmentation that generalizes across imaging modalities and clinical centers.

    Imaging
    28Openness
  • Med-MoE

    15882
    Zhejiang University +2 othersApril 16, 2024histologyimage_classificationinstruction_tuning+5

    A lightweight mixture-of-experts medical vision-language model that routes between domain-specific experts for VQA and image classification while activating only 30-50% of parameters.

    ImagingLanguage modelPathology
    81Openness