All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 1–19 of 19 filtered models
Genos-m
20—177A 4.7B-parameter Mixture-of-Experts genomic foundation model pretrained on ~1.2 trillion nucleotide tokens from human-associated microbial genomes.
DNA & Gene73OpennessOmniGene-4
———A unified bio-language Mixture-of-Experts foundation model spanning DNA, protein sequence and structure, and biological text, applied across eight task families from a single checkpoint.
Language modelDNA & GeneProtein7OpennessOneGenome-Rice
19—135A 1.25B-parameter Mixture-of-Experts genomic foundation model for rice, pretrained on 422 Oryza genomes with a 1 Mbp context window.
DNA & Gene90OpennessSuiren-1.0
17——A family of SE(3)-equivariant molecular foundation models pretrained on ~70M DFT conformers, reaching state of the art on TDC ADMET and MoleHB property-prediction benchmarks.
Small molecule46OpennessAetherCell
—2—Generative virtual-cell engine that unifies clinical RNA-seq and perturbation-assay data to predict transcriptomic responses to unseen compounds and genetic perturbations across biological scales.
Single-cellSmall molecule17OpennessMoLF
———A pan-cancer generative model that predicts spatial gene expression from H&E histology using conditional flow matching with a mixture-of-experts velocity field.
PathologySpatial omics9OpennessGengram
48——Retrieval-augmented genomic foundation model that adds an explicit hash-based k-mer motif memory to transformer backbones, gaining up to 14% on functional genomics tasks.
DNA & Gene83OpennessGenoME
———A Mixture-of-Experts generative model that turns DNA sequence plus cell-type ATAC-seq into unified epigenomic, transcriptomic, and 3D chromatin profiles, generalizing to unseen cell types.
DNA & GeneSingle-cell8Opennessvir2vec
———A 422M-parameter pan-viral genomic language model that produces fixed genome-level embeddings reused across viral classification tasks without re-training.
DNA & Gene53OpennessPlantBiMoE
———A lightweight plant genome foundation model pairing a bidirectional Mamba backbone with a sparse Mixture-of-Experts, pretrained on 25.4B nucleotides from 42 plant species.
DNA & Gene53OpennessNeurIPT
1111—EEG foundation model for brain-computer interfaces, using amplitude-aware masked pretraining and a progressive mixture-of-experts transformer across diverse electrode setups.
Biosignals11OpennessDenseFormer-MoE
—24—A self-supervised foundation model for structural brain MRI combining DenseNet and Vision Transformer with Mixture of Experts for multi-task brain disease diagnosis and brain age prediction.
Imaging8OpennessAIDO.Protein
16321774A 16-billion-parameter mixture-of-experts protein language model pretrained on 1.2 trillion amino acids, the first MoE architecture applied to protein foundation modeling.
Protein29OpennessPaPaGei
16472—The first open foundation model for photoplethysmography (PPG), pretrained on ~20M PPG segments with morphology-aware representation learning for cardiovascular and health tasks.
Biosignals67OpennessMoME
3124—A universal foundation model for brain lesion segmentation on multi-modal brain MRI, using a Mixture of Modality Experts to handle diverse modalities and lesion types.
Imaging79OpennessM4oE
5441—Hong Kong Baptist University +1 otherMay 15, 2024foundation_modelmedical_imagingmixture_of_experts+3A Mixture-of-Experts foundation model for medical multimodal image segmentation that generalizes across imaging modalities and clinical centers.
Imaging28OpennessMed-MoE
15882—A lightweight mixture-of-experts medical vision-language model that routes between domain-specific experts for VQA and image classification while activating only 30-50% of parameters.
ImagingLanguage modelPathology81Openness