All Competitors

Reasoning LLM that predicts antimicrobial susceptibility of clinical bacterial isolates and supplies mechanistic explanations for each prediction.

LoRA fine-tuning framework for ESM-2 with multi-head attention pooling and contact map enhancement for sequence-only protein property prediction.

Lightweight AlphaFlow variant that fine-tunes only AlphaFold's structure module, keeping the Evoformer frozen to cut conformational sampling cost.

Multimodal protein language model extending ESM-2 and SaProt with a Structure Adapter over residue torsion angles for protein function prediction.

Protein conformational ensemble generator that fine-tunes AlphaFold 2 with flow matching, sampling protein dynamics beyond a single static structure.

AlphaFold fine-tuned via OpenFold on 944 high-resolution MHC-peptide structures, reaching median peptide RMSD of 0.65 Å on held-out complexes.

LoRA and QLoRA fine-tuning of ESM-2 for token-level prediction of protein binding sites and post-translational modification sites from sequence alone.

Missense variant pathogenicity predictor built on AlphaFold 2 representations, scoring variants across the human proteome at 0.940 AuROC on ClinVar.

AlphaFold fine-tuned on peptide-MHC and protein-peptide binding data for specificity prediction across MHC class I/II, PDZ, and SH3 domains.