Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 1–8 of 8 filtered models
Infers gene-centered chromatin interactions from bulk RNA-seq alone, mapping 3D genome changes across 12,347 tumor and normal transcriptomes.
Specificity foundation model predicting small-molecule drug-target binding from sequence, scored as cross-modal retrieval without docking or assays.
Signed heterogeneous graph foundation model over the SIGMA-KG knowledge graph, predicting drug mode of action and drug-drug interactions zero-shot.
Generative virtual-cell model predicting whole-transcriptome responses to unseen compounds and genetic perturbations, from cell lines to organoids.
Transformer foundation model pretrained on a biomedical knowledge graph for zero-shot drug repurposing, target, and adverse-effect prediction.
Disease embeddings learned from human genetic evidence and phenotype ontologies, placing rare and common conditions in one mechanistic vector space.
Drug-target affinity prediction pairing an SE(3)-equivariant GNN over 3D protein structure with a molecular GNN and residue-atom cross-attention.
Drug repurposing model that predicts a compound's L1000 transcriptional signature from SMILES and ranks it against a disease gene signature.