All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 73–96 of 105 filtered models
MaCo
1276—Chest X-ray foundation model that pairs masked image modeling with image-report contrastive alignment for zero-shot diagnosis and phrase grounding.
Imaging74OpennessBELT-2
—12—EEG-to-language foundation model that pairs a Q-Conformer encoder with a frozen LLM to decode coherent sentences from non-invasive brain recordings.
BiosignalsLanguage model30OpennessECG-Chat
8248—China University of Geosciences +2 othersAugust 16, 2024cardiologycontrastive_learningdisease_classification+6Multimodal ECG-language model aligning 12-lead waveforms with clinical report text for conversational cardiac diagnosis and report generation.
BiosignalsLanguage model27OpennessSiamQuality
181—Foundation model for photoplethysmography (PPG) that learns quality-robust waveform representations for heart rate, blood pressure, and AF detection.
Biosignals36OpennessECG-FM
30096—Open transformer foundation model for 12-lead electrocardiograms, pretrained on 1.5 million unlabeled ECGs with a wav2vec 2.0 self-supervised recipe.
Biosignals67OpennessAnatCL
1820—Brain MRI foundation model family pretrained with anatomically informed contrastive learning for diagnosis and clinical score prediction.
Imaging71OpennessMADELEINE
6745—Slide-level pathology foundation model that learns whole-slide embeddings by aligning multiple stains of the same tissue during pretraining.
Pathology42OpennessCXR Foundation
19982199Chest X-ray embedding model built on ELIXR, producing image and image-text embeddings for data-efficient and zero-shot radiograph classification.
ImagingCREMA
—7—Self-supervised foundation model for 12-lead ECG, pairing masked autoencoder pretraining with contrastive regularization for robust diagnostics.
Biosignals10OpennessOPERA
8346—Respiratory acoustic foundation models pretrained on roughly 136K cough and breathing recordings for disease detection and lung function estimation.
Biosignals59OpennessProTrek
2102441Tri-modal protein language model aligning sequence, structure, and text in one embedding space for natural-language search over billions of proteins.
Protein66OpennessSleepFM
17556—Multi-modal foundation model for sleep analysis, learning joint representations across brain, cardiac, and respiratory polysomnography signals.
Biosignals76OpennessECG foundation model that learns 12-lead waveform representations by contrastively aligning each recording with machine-generated cardiological text.
Biosignals63OpennessMammo-CLIP
98—45Vision-language foundation model pre-trained on screening mammogram-report pairs to improve data efficiency and robustness in breast cancer detection.
ImagingPathology27OpennessEchoCLIP
51218—CLIP-style vision-language model for echocardiography, pretrained on echo videos and cardiologist reports for zero-shot cardiac interpretation.
Imaging32OpennessCONCH
5181K67.1KHistopathology vision-language foundation model pretrained on 1.17 million image-caption pairs with contrastive and captioning objectives.
Imaging44OpennessSelf-supervised 3D CT foundation model that extracts general-purpose tumor representations for cancer imaging biomarker discovery and prognosis.
Imaging92OpennessVoCo
230113—Hong Kong University of Science and TechnologyFebruary 27, 2024contrastive_learningctfoundation_model+5Self-supervised pretraining framework for 3D medical image encoders that learns anatomy by predicting where a sub-volume sits within a CT scan.
Imaging69OpennessDNABERT-S
1305324.1KDNA embedding model built on DNABERT-2, using contrastive learning to cluster sequences by species for metagenomic binning without labeled data.
DNA & Gene53OpennessDerm Foundation
374631Google's dermatology image embedding model that produces 6144-dimensional embeddings for data-efficient skin-condition classifiers.
ImagingSelf-supervised foundation models for wearable PPG and ECG signals, trained with contrastive learning on Apple Heart and Movement Study recordings.
Biosignals5OpennessT3D
—16—Vision-language pretraining for 3D CT volumes, aligning scans with their radiology reports for zero-shot classification, retrieval, and segmentation.
ImagingLanguage model12OpennessBioCLIP
27024124.8KVision foundation model for the tree of life, trained on TreeOfLife-10M for zero-shot species classification of plants, animals, and fungi.
Imaging93OpennessCXR-CLIP
123138—Large-scale chest X-ray vision-language pretraining model that learns image-report alignment for zero-shot and few-shot radiograph classification.
Imaging18Openness