All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 457–480 of 518 filtered models
RibonanzaNet
137—RNA foundation model trained on chemical-mapping data from millions of sequences, predicting reactivity, secondary structure, and degradation.
RNA74OpennessBrainWave (Brant-2)
4731—Foundation model spanning invasive SEEG/iEEG and non-invasive EEG in one backbone, with zero- and few-shot transfer across neurological disorders.
Biosignals10OpennessRNAformer
436—RNA secondary structure prediction from a single sequence, without MSAs, using an axial-attention transformer trained with strict homology controls.
RNA53OpennessCheXagent
23075981Instruction-tuned vision-language foundation model for chest X-ray interpretation, with 8 billion parameters spanning eight clinical task types.
ImagingLanguage model32OpennessxTrimoPGLM
2153—Unified 100-billion-parameter protein language model combining autoencoding and autoregressive objectives for protein understanding and generation.
Protein30OpennessBrant
4294—500M-parameter transformer model pretrained on intracranial SEEG recordings for neural signal forecasting, imputation, and seizure detection.
Biosignals75OpennessT3D
—16—Vision-language pretraining for 3D CT volumes, aligning scans with their radiology reports for zero-shot classification, retrieval, and segmentation.
ImagingLanguage model12OpennessUCE
312174—Single-cell foundation model producing species-agnostic cell embeddings by representing genes through frozen ESM-2 protein language model embeddings.
Single-cell65OpennessMHC-Fine
—9—AlphaFold fine-tuned via OpenFold on 944 high-resolution MHC-peptide structures, reaching median peptide RMSD of 0.65 Å on held-out complexes.
Protein35OpennessESMBind & QBind
8142LoRA and QLoRA fine-tuning of ESM-2 for token-level prediction of protein binding sites and post-translational modification sites from sequence alone.
Protein93OpennesstrRosettaRNA
37204—RNA 3D structure prediction pipeline pairing a transformer (RNAformer) that predicts inter-nucleotide geometries with Rosetta energy minimization.
RNA72OpennessNeuro-GPT
22899—University of Southern California +1 otherNovember 7, 2023brain_computer_interfaceeegfoundation_model+5EEG foundation model that pairs a convolutional encoder with a GPT backbone, pretrained by masked-segment reconstruction for low-data BCI decoding.
Biosignals46OpennessQilin-Med-VL
65825Chinese medical vision-language model pairing a Vision Transformer with an LLM to caption medical images and answer clinical questions in Chinese.
Language modelPathology44OpennessCXR-LLaVA
5439180Seoul National University +1 otherOctober 22, 2023abnormality_classificationchest_x_rayinstruction_tuning+6Chest X-ray vision-language model that generates free-text radiology reports, pairing a CXR-specific image encoder with a 7B LLaMA-2 language model.
ImagingLanguage model27OpennessCLIP-Driven Universal Model
677356—Abdominal CT segmentation model driven by CLIP text embeddings, covering 25 organs and 6 tumor types with zero-shot extension to new categories.
Imaging26OpennessAlphaMissense
6351.7K—Missense variant pathogenicity predictor built on AlphaFold 2 representations, scoring variants across the human proteome at 0.940 AuROC on ClinVar.
Protein44OpennessUniBrain
39183—Vision-language pre-training framework for universal brain MRI diagnosis, learning from imaging-report pairs to cover more than ten brain diseases.
Imaging35OpennessEvoDiff
675226—Discrete diffusion model for protein sequence and MSA generation, enabling controllable de novo design directly in sequence space without structure.
Protein84OpennessBrainLM
18130—Yale University +2 othersSeptember 12, 2023brain_state_forecastingclinical_variable_predictionfmri+7fMRI foundation model pretrained with masked autoencoding on roughly 6,700 hours of recordings for clinical prediction and network discovery.
Biosignals25OpennessRadFM
561263—Radiology foundation model that reads interleaved 2D and 3D scans with text for diagnosis, visual question answering, and report generation.
ImagingLanguage model84OpennessMed-Flamingo
452618—Multimodal medical vision-language model for few-shot visual question answering, learning new imaging tasks from in-context examples at inference.
PathologyLanguage model18Openness