All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 361–384 of 552 filtered models
PaPaGei
17481—Open foundation model for photoplethysmography (PPG), learning morphology-aware waveform representations for cardiovascular and wearable health tasks.
Biosignals67OpennessBioMed Multi-View
4675.2KMolecular foundation model that late-fuses graph, image, and SMILES encoders into one embedding for molecular property and drug target prediction.
Small molecule77OpennessWearable sensor foundation model pretrained on heart rate, accelerometer, skin temperature and other channels for activity recognition and imputation.
Biosignals7OpennessgCIS
109—CT segmentation foundation model that uses task prompts to segment 83 anatomical structures and lesions across whole-body scans in a single network.
Imaging14OpennessOrthrus
1291819.9KMamba-based mature RNA foundation model, contrastively trained on splice isoforms and 400+ mammalian species orthologs for mRNA property prediction.
RNA71OpennessCryoFM
35722Generative foundation model for cryo-EM density maps using flow matching, enabling zero-shot denoising, map sharpening, and missing wedge restoration.
Imaging77OpennessMasked-autoencoder foundation model pretrained on digital-stethoscope heart sounds and single-lead ECG for cardiovascular disease detection.
Biosignals22OpennessChai-1
2K403—Biomolecular structure prediction foundation model covering proteins, small molecules, DNA, RNA, and glycans in a single diffusion framework.
Protein49OpennessGeneCompass
119137—Knowledge-informed cross-species foundation model pre-trained on 101 million human and mouse single-cell transcriptomes to decipher gene regulation.
Single-cell32OpennessECGFounder
14234121Convolutional ECG foundation model trained on expert annotations spanning 150 diagnostic categories, with 12-lead and single-lead wearable variants.
Biosignals75OpennessECG-JEPA
1617—Joint-embedding predictive foundation model pretrained on over a million unlabeled ECGs, learning transferable 12-lead representations for diagnosis.
Biosignals62OpennessGenerRNA
1947—Transformer-based generative language model for de novo RNA design, pretrained on 16 million non-coding RNA sequences from RNAcentral.
RNA75OpennessBrain-JEPA
17479—Brain-dynamics foundation model for resting-state fMRI, adapting the Joint-Embedding Predictive Architecture with brain gradient positioning.
BiosignalsImaging18OpennessTUMSyn
4526—Text-guided MRI synthesis model that generates brain MR sequences and resolutions on demand from routine scans using imaging-metadata prompts.
Imaging28OpennessCHIEF
715545—Weakly supervised histopathology foundation model pretrained on 60,530 whole-slide images for cancer detection, prognosis, and molecular prediction.
Pathology15OpennessMaCo
1276—Chest X-ray foundation model that pairs masked image modeling with image-report contrastive alignment for zero-shot diagnosis and phrase grounding.
Imaging74OpennessBELT-2
—12—EEG-to-language foundation model that pairs a Q-Conformer encoder with a frozen LLM to decode coherent sentences from non-invasive brain recordings.
BiosignalsLanguage model30OpennessSPIRED-Fitness
5039—End-to-end framework predicting protein structure and mutational fitness from a single sequence, with five-fold faster inference than ESMFold.
Protein79OpennessNeuroLM
163101—Multi-task EEG foundation model that treats brain signals as a foreign language, pairing a text-aligned neural tokenizer with a GPT-2 backbone.
BiosignalsLanguage model66OpennessSiamQuality
181—Foundation model for photoplethysmography (PPG) that learns quality-robust waveform representations for heart rate, blood pressure, and AF detection.
Biosignals36OpennessECG-FM
30096—Open transformer foundation model for 12-lead electrocardiograms, pretrained on 1.5 million unlabeled ECGs with a wav2vec 2.0 self-supervised recipe.
Biosignals67OpennessBiomedGPT
7084062Open-source, lightweight generalist vision-language foundation model for diverse biomedical imaging and text tasks.
Language modelImagingPathology33OpennessAnatCL
1820—Brain MRI foundation model family pretrained with anatomically informed contrastive learning for diagnosis and clinical score prediction.
Imaging71OpennessLLaVA-Tri
412944Medical vision-language model trained on the MedTrinity-25M dataset, answering questions and generating text about radiology and histology images.
Language modelPathology30Openness