All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 361384 of 552 filtered models

  • PaPaGei

    17481
    Nokia Bell LabsOctober 27, 2024bias_evaluationcardiovascular_healthcnn+5

    Open foundation model for photoplethysmography (PPG), learning morphology-aware waveform representations for cardiovascular and wearable health tasks.

    Biosignals
    67Openness
  • IBM ResearchOctober 25, 2024drug_discoveryfoundation_modelgraph_neural_network+5

    Molecular foundation model that late-fuses graph, image, and SMILES encoders into one embedding for molecular property and drug target prediction.

    Small molecule
    77Openness
  • Google ResearchOctober 17, 2024activity_recognitionfoundation_modelgenerative_modeling+5

    Wearable sensor foundation model pretrained on heart rate, accelerometer, skin temperature and other channels for activity recognition and imputation.

    Biosignals
    7Openness
  • gCIS

    109
    United Imaging Intelligence +1 otherOctober 14, 2024ct_imagingfoundation_modellesion_detection+4

    CT segmentation foundation model that uses task prompts to segment 83 anatomical structures and lesions across whole-body scans in a single network.

    Imaging
    14Openness
  • Orthrus

    1291819.9K
    Bowang LabOctober 12, 2024contrastive_learningfoundation_modelrna_structure+1

    Mamba-based mature RNA foundation model, contrastively trained on splice isoforms and 400+ mammalian species orthologs for mRNA property prediction.

    RNA
    71Openness
  • CryoFM

    35722
    ByteDance SeedOctober 11, 2024cryo_emdensity_mapsflow_matching+3

    Generative foundation model for cryo-EM density maps using flow matching, enabling zero-shot denoising, map sharpening, and missing wedge restoration.

    Imaging
    77Openness
  • Eko HealthOctober 11, 2024disease_detectionecgfoundation_model+5

    Masked-autoencoder foundation model pretrained on digital-stethoscope heart sounds and single-lead ECG for cardiovascular disease detection.

    Biosignals
    22Openness
  • Chai-1

    2K403
    Chai DiscoveryOctober 11, 2024diffusiondrug_discoveryfoundation_model+2

    Biomolecular structure prediction foundation model covering proteins, small molecules, DNA, RNA, and glycans in a single diffusion framework.

    Protein
    49Openness
  • GeneCompass

    119137
    Chinese Academy of SciencesOctober 8, 2024cross_speciesfoundation_modelregulatory_genomics+1

    Knowledge-informed cross-species foundation model pre-trained on 101 million human and mouse single-cell transcriptomes to decipher gene regulation.

    Single-cell
    32Openness
  • ECGFounder

    14234121
    Peking University +2 othersOctober 5, 2024arrhythmia_detectioncardiologycnn+6

    Convolutional ECG foundation model trained on expert annotations spanning 150 diagnostic categories, with 12-lead and single-lead wearable variants.

    Biosignals
    75Openness
  • ECG-JEPA

    1617
    Zuse Institute Berlin +1 otherOctober 2, 2024ecg_classificationelectrocardiogramfoundation_model+4

    Joint-embedding predictive foundation model pretrained on over a million unlabeled ECGs, learning transferable 12-lead representations for diagnosis.

    Biosignals
    62Openness
  • GenerRNA

    1947
    Preferred NetworksOctober 1, 2024de_novo_designfoundation_modelgenerative

    Transformer-based generative language model for de novo RNA design, pretrained on 16 million non-coding RNA sequences from RNAcentral.

    RNA
    75Openness
  • Brain-JEPA

    17479
    National University of SingaporeSeptember 28, 2024brain_dynamicsdisease_diagnosisfmri+5

    Brain-dynamics foundation model for resting-state fMRI, adapting the Joint-Embedding Predictive Architecture with brain gradient positioning.

    BiosignalsImaging
    18Openness
  • TUMSyn

    4526
    ShanghaiTech University +2 othersSeptember 25, 2024cnncontrastive_learningfoundation_model+6

    Text-guided MRI synthesis model that generates brain MR sequences and resolutions on demand from routine scans using imaging-metadata prompts.

    Imaging
    28Openness
  • CHIEF

    715545
    Harvard Medical School +2 othersSeptember 4, 2024cancer_detectionfoundation_modelhistology+8

    Weakly supervised histopathology foundation model pretrained on 60,530 whole-slide images for cancer detection, prognosis, and molecular prediction.

    Pathology
    15Openness
  • MaCo

    1276
    Shanghai AI LaboratorySeptember 2, 2024chest_x_raycontrastive_learningfoundation_model+9

    Chest X-ray foundation model that pairs masked image modeling with image-report contrastive alignment for zero-shot diagnosis and phrase grounding.

    Imaging
    74Openness
  • BELT-2

    12
    University of Technology SydneyAugust 28, 2024brain_to_textconformercontrastive_learning+6

    EEG-to-language foundation model that pairs a Q-Conformer encoder with a frozen LLM to decode coherent sentences from non-invasive brain recordings.

    BiosignalsLanguage model
    30Openness
  • Tsinghua UniversityAugust 27, 2024foundation_modelstructure_predictionvariant_effect_prediction

    End-to-end framework predicting protein structure and mutational fitness from a single sequence, with five-fold faster inference than ESMFold.

    Protein
    79Openness
  • NeuroLM

    163101
    Shanghai Jiao Tong University +1 otherAugust 27, 2024eegeeg_decodingfoundation_model+7

    Multi-task EEG foundation model that treats brain signals as a foreign language, pairing a text-aligned neural tokenizer with a GPT-2 backbone.

    BiosignalsLanguage model
    66Openness
  • Georgia Institute of Technology +1 otherAugust 12, 2024cnncontrastive_learningfoundation_model+3

    Foundation model for photoplethysmography (PPG) that learns quality-robust waveform representations for heart rate, blood pressure, and AF detection.

    Biosignals
    36Openness
  • ECG-FM

    30096
    University of Toronto +1 otherAugust 9, 2024cardiologycontrastive_learningdisease_classification+6

    Open transformer foundation model for 12-lead electrocardiograms, pretrained on 1.5 million unlabeled ECGs with a wav2vec 2.0 self-supervised recipe.

    Biosignals
    67Openness
  • BiomedGPT

    7084062
    Lehigh University +9 othersAugust 7, 2024foundation_modelhistologyimage_captioning+7

    Open-source, lightweight generalist vision-language foundation model for diverse biomedical imaging and text tasks.

    Language modelImagingPathology
    33Openness
  • AnatCL

    1820
    University of Turin +1 otherAugust 7, 20243d_cnnbrain_age_predictionbrain_mri+7

    Brain MRI foundation model family pretrained with anatomically informed contrastive learning for diagnosis and clinical score prediction.

    Imaging
    71Openness
  • LLaVA-Tri

    412944
    UC Santa Cruz +3 othersAugust 6, 2024foundation_modelhistologymultimodal+5

    Medical vision-language model trained on the MedTrinity-25M dataset, answering questions and generating text about radiology and histology images.

    Language modelPathology
    30Openness