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IBM Research

Part of IBM

IBM's research division

Website
5 models(3 Small molecule, 2 Protein, 1 DNA & Gene, 1 Single-cell)

Models (5)

BioMed Multi-Omic

IBM Research

Released June 1, 2025

2359

Open-source framework for building RNA and DNA foundation models, featuring WCED pretraining for transcriptomics and SNP-aware encoding for genomics.

DNA & Gene

MAMMAL

IBM Research

Released October 28, 2024

81.9K109

Multi-modal, multi-task biological foundation model trained on 2 billion samples spanning proteins, small molecules, and single-cell gene expression.

ProteinSmall moleculeSingle-cell

BioMed Multi-View

IBM Research

Released October 25, 2024

613244

Multi-view molecular foundation model that integrates graph, image, and text representations via late fusion for molecular property and target prediction.

Small molecule

GearNet

Mila / IBM Research

Released February 1, 2023

321319

A geometric relational graph neural network that learns protein structure representations via geometry-aware message passing and self-supervised pretraining.

Protein

MoLFormer-XL

IBM Research

Released October 3, 2022

549451.2K400

Large-scale chemical language model trained on 1.1 billion SMILES strings using linear attention transformers for molecular property prediction.

Small molecule