All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 265–288 of 552 filtered models
Chai-2
—58—Multimodal all-atom generative model for zero-shot de novo antibody and protein-binder design, validated by wet-lab hit rates from small batches.
Protein7OpennessMORPH
156—Single-cell perturbation-response model that predicts transcriptomic and imaging outcomes of unseen genetic perturbations via a VAE with attention.
Single-cellImaging7Openness- University of Oxford +5 othersJuly 1, 2025clinical_outcome_predictioncross_modality_generationdiagnosis+8
Multimodal foundation model for cardiac biosignals, pretrained by masked modeling on ECG, PPG, and clinical text from ~1.7 million individuals.
BiosignalsLanguage model26Openness RadiologyNET
58—Family of CNN foundation models pretrained on multimodal radiology images, a domain-specific alternative to ImageNet transfer learning weights.
Imaging53OpennessApple's foundation model trained on behavioral signals from wearables, modeling 27 HealthKit metrics to improve predictions across 57 health tasks.
Biosignals7OpennessAlphaGenome
2K154—DNA foundation model that predicts thousands of functional genomic tracks, from expression and splicing to chromatin, at single base-pair resolution.
DNA & Gene49OpennessSTATE
623117255Virtual cell transformer that predicts how cells respond to genetic, chemical, or signaling perturbations, generalizing to unseen cellular contexts.
Single-cell21Openness5.6M-parameter multimodal foundation model fusing fMRI time series with diffusion-MRI structural connectivity in a shared ROI embedding space.
ImagingBiosignals71OpennessEyeCLIP
8765—The Hong Kong Polytechnic University +5 othersJune 21, 2025clipcontrastive_learningcross_modal_retrieval+11CLIP-based vision-language foundation model for eye imaging, enabling zero-shot disease detection and cross-modal retrieval across 11 modalities.
ImagingLanguage model15OpennessLucaVirus
745161Multimodal viral foundation model over nucleotide and protein sequence, built for virus discovery, function annotation, and antibody design.
DNA & GeneProtein88OpennessPhysioWave
18914—Physiological signal foundation model for ECG, EMG, and EEG pairing learnable multi-scale wavelet decomposition with masked transformer pretraining.
Biosignals80OpennessNeuroSTORM
1164—Spatiotemporal foundation model that learns representations directly from 4D functional MRI volumes for disease diagnosis and phenotype prediction.
ImagingBiosignals78OpennessSensorLM
—58—Google Research +2 othersJune 10, 2025activity_recognitioncontrastive_learningcross_modal_retrieval+6Sensor-language foundation models aligning wearable biosignals with text for zero-shot activity recognition, retrieval, and sensor captioning.
BiosignalsLanguage model41OpennessLingshu
3199145KGeneralist medical multimodal LLM for image understanding, visual question answering, and report generation across twelve-plus imaging modalities.
ImagingLanguage model70OpennessKRONOS
20432582Spatial proteomics foundation model, marker-aware and panel-agnostic, pretrained on 47 million multiplexed tissue-imaging patches from 175 markers.
Spatial omicsPathology12OpennessBioMed Multi-Omic
62—26Open-source framework for building RNA and DNA foundation models, featuring WCED pretraining for transcriptomics and SNP-aware encoding for genomics.
DNA & Gene84OpennessBioCLIP 2
774348.5KVision foundation model for the tree of life, trained on 214 million organism images across 952,000 taxa for zero-shot species classification.
Imaging93OpennessDreaMS
19572—Self-supervised transformer pretrained on millions of tandem mass spectra, giving embeddings for spectral annotation and fingerprint prediction.
MetabolomicsSmall molecule98OpennessBrainOmni
7128—Brain foundation model unifying EEG and MEG in a single encoder via a shared discrete tokenizer that transfers across sensor layouts and montages.
Biosignals80OpennessCellpose-SAM
2.3K192—Generalist cell segmentation model pairing SAM's ViT-L encoder with Cellpose flow fields, outperforming average human annotators on its benchmark.
Imaging50OpennessSAM-Brain3D
59—Brain MRI segmentation foundation model trained on 66,000+ image-label pairs across 14 MRI sub-modalities, with a hypergraph dynamic adapter.
Imaging26Openness