All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 1–24 of 55 filtered models
DaX
1——Pathology vision foundation model adapting DINOv3-style self-supervised learning to whole-slide histopathology across continuous magnifications and scales.
Pathology11OpennessSQUALL
———Multimodal foundation model pretrained on 1.76 billion paired histology-spatial transcriptomics spots, linking whole-slide images to spatial molecular programs.
PathologySpatial omics6OpennessSciCore-Omics
8—230A tri-modal foundation model unifying histology images, spatial transcriptomics, and biological language for zero-shot spatial biology and pathology reasoning.
PathologySpatial omics65OpennessSTMDiT
———A diffusion transformer that synthesizes H&E histopathology image patches conditioned jointly on spatial transcriptomics gene expression and morphological embeddings.
PathologySpatial omics44OpennessGenBloom
3——Genetically aligned foundation model for blood smear cytology that links single white-blood-cell morphology to chromosomal aberrations and mutations for AML/APL diagnosis.
Pathology65Openness- Hong Kong University of Science and Technology +9 othersMay 25, 2026clinical_decision_supportfoundation_modellung_tissue+7
A subspecialty lung-pathology foundation model, fine-tuned from Virchow2 and prospectively validated across 32 clinical tasks spanning the lung diagnostic workflow.
Pathology5Openness BRIDGE
———The University of Hong KongMay 8, 2026contrastive_learningfoundation_modelgene_expression_prediction+8A multi-organ foundation model aligning histology image features with spatial-transcriptomics gene expression across 13 organs for zero-shot virtual ST and survival prediction.
PathologySpatial omics31OpennessPhoenix
———Latent flow-matching foundation model that predicts pan-cancer spatially-resolved single-cell gene expression directly from routine H&E histology slides.
PathologySpatial omics8OpennessH2O
———Tencent AI for Life Science Lab +2 othersApril 24, 2026contrastive_learningfoundation_modelgene_expression+6A foundation model that predicts spatial transcriptomics and proteomics directly from routine H&E whole-slide images using a vision transformer aligned with a language model.
PathologySpatial omics7OpennessSMILE
———A Schrödinger-bridge diffusion model for virtual multiplex staining that translates standard H&E histology into multiplex immunohistochemistry images.
Pathology8OpennessMuPD
———A generative diffusion-transformer foundation model that embeds H&E histology, RNA profiles, and clinical text in a shared latent space for zero-shot cross-modal synthesis.
PathologySpatial omics15OpennessSTORM
—1—Stanford UniversityApril 4, 2026clinical_outcome_predictionfoundation_modelgene_expression_prediction+7A hierarchical multimodal foundation model integrating spatial transcriptomics and H&E histology for biological discovery and platform-agnostic clinical prediction.
Spatial omicsPathology17OpennessDigepath
———Subspecialty-specific computational pathology foundation model pretrained on 353 million multi-scale patches from 210,000 H&E slides for gastrointestinal pathology, achieving SOTA on 32 of 33 systematic downstream tasks.
Pathology15OpennessGenBio-PathFM
3423171.1B-parameter histopathology foundation model trained on public data with a JEDI (JEPA+DINO) dual-stage strategy, reaching state-of-the-art on THUNDER, HEST, and PathoROB.
Pathology21OpennessUNIStainNet
4——Foundation-model-guided virtual staining that generates four IHC markers (HER2, Ki67, ER, PR) from H&E using a single SPADE-UNet conditioned on a frozen UNI encoder.
Pathology17OpennessA self-supervised, cell-centric pretraining strategy that distills morphology and microenvironment views of each cell into a unified embedding for virtual spatial omics from microscopy.
Spatial omicsImagingPathology15OpennessEVA
——105Cross-species, multimodal foundation model of immunology and inflammation that harmonizes transcriptomics and histology into unified patient-level representations.
Single-cellRNAPathology27OpennessMoLF
———A pan-cancer generative model that predicts spatial gene expression from H&E histology using conditional flow matching with a mixture-of-experts velocity field.
PathologySpatial omics9OpennessFOCUS
———Generative foundation model that enhances spatial transcriptomics by conditioning on H&E histology, scRNA-seq references, and spatial co-expression priors.
Spatial omicsPathologySingle-cell4OpennessM-Optimus
———Bioptimus's first multimodal, multi-scale World Model for biology, integrating histology, transcriptomics, and clinical data from millions of patients into a unified embedding space.
PathologySpatial omicsSingle-cell3OpennessGPFM
12637—Hong Kong University of Science and Technology +3 othersNovember 1, 2025cancer_diagnosisfeature_extractionfoundation_model+8A generalizable computational-pathology foundation model trained on ~190M histopathology patches via unified knowledge distillation from UNI, Phikon, and CONCH.
Pathology84OpennessChiron-o1
5996Medical multimodal LLM (2B and 8B) trained for generalizable, step-by-step clinical reasoning via Mentor-Intern Collaborative Search.
PathologyImaging67Openness