All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 17 of 7 filtered models

  • seq2ribo

    11365
    Carnegie Mellon UniversityApril 3, 2026mambamrnamrna_design+3

    Hybrid framework that predicts ribosome location profiles from mRNA sequence alone, pairing a structure-aware TASEP simulation with a Mamba polisher.

    RNA
    18Openness
  • RegFormer

    BGI ResearchApril 1, 2026cell_clusteringbatch_integrationperturbation_modeling+7

    Single-cell foundation model combining regulatory network priors with a Mamba backbone for clustering, batch integration, and perturbation modeling.

    Single-cell
    10Openness
  • Brown UniversityNovember 25, 2025dnafoundation_modelgenomics+5

    Bidirectional state-space (Mamba-2) genomic model for ultra-long extrachromosomal circular DNA, scaling linearly with sequence length.

    DNA & Gene
    54Openness
  • AppleJune 30, 2025health_predictionrepresentation_learningstate_space_model+4

    Apple's foundation model trained on behavioral signals from wearables, modeling 27 HealthKit metrics to improve predictions across 57 health tasks.

    Biosignals
    7Openness
  • STRESS

    Tsinghua UniversityJune 27, 2025gene_expression_imputationmambaself_supervised+2

    Spatial transcriptomics resolution enhancement from expression alone, using a tri-oriented Mamba encoder to predict expression between capture spots.

    Spatial omics
    45Openness
  • NeuroSTORM

    1194
    Chinese University of Hong Kong +7 othersJune 11, 2025disease_diagnosisphenotype_predictionrepresentation_learning+6

    Spatiotemporal foundation model that learns representations directly from 4D functional MRI volumes for disease diagnosis and phenotype prediction.

    ImagingBiosignals
    78Openness
  • araCNA

    1
    University of OxfordJanuary 22, 2025cancercopy_number_alteration_callingmamba+4

    Somatic copy-number alteration calling from tumor whole-genome sequencing, using Mamba and Hyena blocks over genome-scale inputs of about 1M loci.

    DNA & Gene
    84Openness