All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 25–48 of 141 filtered models
SpatialDINO
—1—Native 3D vision transformer self-supervised on unlabeled fluorescence microscopy volumes, segmenting subcellular structures without voxel labels.
Imaging8OpennessEXAONE Path 2.5
5280Pathology foundation model that aligns whole-slide images with genomic, epigenetic, and transcriptomic data for patient-level tumor representations.
PathologySpatial omics14OpennessEva
—4—Enable Medicine +4 othersDecember 12, 2025cell_type_annotationcross_modal_inferencefoundation_model+8Tissue imaging foundation model pretrained on matched H&E histology and spatial proteomics for cross-modal inference and zero-shot retrieval.
PathologySpatial omics4OpennessNeuroVFM
554654University of Michigan +1 otherNovember 23, 2025ctfoundation_modeljoint_embedding_predictive_architecture+8Generalist neuroimaging vision foundation model pretrained on 5.24M clinical MRI and CT volumes for radiologic diagnosis and report generation.
Imaging57OpennessSHEST
1——Samsung Advanced Institute for Health Sciences and Technology +2 othersNovember 19, 2025cell_type_annotationgene_expressionhistology+5Histopathology model that predicts single-cell type composition and reconstructs spatial gene expression from H&E slides, with no molecular assay.
PathologySpatial omics16OpennessUni-Hema
—1—Information Technology University of the Punjab +1 otherNovember 18, 2025classificationcnnfoundation_model+8Digital hematopathology foundation model unifying blood-cell detection, classification, segmentation, and visual question answering.
Pathology8OpennessJWTH
—1—Pathology foundation model that fuses global patch and cell-level tokens via joint-weighted attention pooling for H&E-based biomarker detection.
Pathology5OpennessGPFM
12954—Hong Kong University of Science and Technology +3 othersNovember 1, 2025cancer_diagnosisfeature_extractionfoundation_model+8Histopathology foundation model extracting general-purpose features from H&E patches by distilling the UNI, Phikon, and CONCH pathology encoders.
Pathology84OpennessMetaboFM
—2—Georgia Institute of TechnologyOctober 23, 2025classificationfoundation_modelmass_spectrometry_imaging+6Vision Transformer foundation model for spatial metabolomics, pretrained on ~4,000 curated METASPACE mass spectrometry imaging datasets.
MetabolomicsSpatial omicsImaging10OpennessCoLiPRI
—155.5KVision-language encoders for chest CT that align 3D volumes with radiology reports using contrastive, report-generation, and masked-image objectives.
Imaging60OpennessPUMBA
—1—Florida International UniversityOctober 19, 2025protein_protein_interactionrepresentation_learningstate_space_model+2Protein-protein docking scorer that ranks interface poses from image-encoded patches, swapping PIsToN's Vision Transformer for Vision Mamba.
Protein20OpennessMIMO
1227—Medical vision-language model that takes visual prompts on an image and returns answers grounded in pixel-level segmentation masks.
ImagingLanguage model11OpennessDenseFormer-MoE
—27—Brain MRI foundation model pairing DenseNet and Vision Transformer backbones with mixture of experts for disease diagnosis and brain age prediction.
Imaging8OpennessPathQC
1——Pan-tissue quality-control model that predicts RNA integrity and autolysis from H&E whole-slide images using frozen UNI foundation model embeddings.
Pathology25OpennessDeepSpot2Cell
152—Predicts virtual single-cell spatial transcriptomics from H&E histology using frozen pathology foundation models and spot-level supervision.
PathologySpatial omics58OpennessHistology vision transformer with 80M parameters that predicts spatial gene expression from H&E tissue images and transfers to tumor detection.
PathologySpatial omics59OpennessMedGemma
1.6K374127.1KOpen medical multimodal models from Google, built on Gemma 3 with a medically tuned SigLIP vision encoder for clinical text and image understanding.
Language modelImaging41OpennessMedSigLIP
29837421KMedically tuned SigLIP encoder from Google that maps medical images and text into one embedding space for zero-shot classification and retrieval.
ImagingPathology30OpennessSigPhi-Med
594Chongqing University of TechnologyJuly 1, 2025histologyinstruction_tuningmedical_image_understanding+5Biomedical vision-language assistant for medical visual question answering, pairing Phi-2 with a vision encoder in a 4.2B-parameter model.
ImagingLanguage model15OpennessEyeCLIP
8765—The Hong Kong Polytechnic University +5 othersJune 21, 2025clipcontrastive_learningcross_modal_retrieval+11CLIP-based vision-language foundation model for eye imaging, enabling zero-shot disease detection and cross-modal retrieval across 11 modalities.
ImagingLanguage model15OpennessChiron-o1
601421Medical multimodal LLM (2B and 8B) trained for generalizable, step-by-step clinical reasoning via Mentor-Intern Collaborative Search.
PathologyImaging67OpennessSensorLM
—58—Google Research +2 othersJune 10, 2025activity_recognitioncontrastive_learningcross_modal_retrieval+6Sensor-language foundation models aligning wearable biosignals with text for zero-shot activity recognition, retrieval, and sensor captioning.
BiosignalsLanguage model41Openness