All Competitors
Every biological foundation model, evaluated and ranked by the bio.rodeo team
Showing 385–408 of 518 filtered models
ppLM-CO
———Codon optimization framework that adds a generative head to a frozen ProtBert protein language model to design highly expressed coding sequences.
RNAProtein12OpennessNormWear
5931116University of California, San DiegoDecember 12, 2024disease_risk_predictionfoundation_modelmultimodal+5Multimodal foundation model for wearable physiological sensing across PPG, ECG, EEG, GSR, and IMU signals, using channel-aware attention.
Biosignals77OpennessProCyon
6013—Multimodal foundation model integrating protein sequence, structure, and natural language to model and generate protein phenotypes across scales.
ProteinLanguage modelSmall molecule83OpennessBiMediX2
742120Mohamed bin Zayed University of Artificial IntelligenceDecember 10, 2024histologyinstruction_tuninglanguage_model+7Bilingual Arabic-English medical multimodal model built on Llama 3.1 for radiology, CT, and histology image understanding and question answering.
Language modelImagingPathology11OpennessCBraMod
329185—EEG foundation model for brain-computer interface decoding, factorizing self-attention into parallel spatial and temporal branches.
Biosignals78OpennessPLAID
12714—Latent diffusion model for controllable all-atom protein generation that co-designs sequence and structure while training on sequences alone.
Protein77OpennessESM Cambrian
2.9K—1.5KProtein language model family at 300M, 600M, and 6B parameters, purpose-built for representation learning and outperforming ESM-2 at smaller scale.
Protein16OpennessAIDO.Protein
1682290Mixture-of-experts protein language model scaling to 16 billion parameters, applied to variant effect prediction and de novo protein design.
Protein29OpennessSeqProFT
24—LoRA fine-tuning framework for ESM-2 with multi-head attention pooling and contact map enhancement for sequence-only protein property prediction.
Protein13OpennessAnyECG
45—Zhejiang University +3 othersNovember 17, 2024anomaly_detectionarrhythmia_classificationelectrocardiogram+6ECG foundation model that learns discrete rhythm tokens from noisy real-world recordings for arrhythmia classification and anomaly detection.
Biosignals10OpennessLOL-EVE
238Conditional autoregressive genomic language model trained on 13.6M mammalian promoters, scoring promoter variants, including indels, zero-shot.
DNA & Gene89OpennessNatureLM-audio
99551.9KAudio-language foundation model for bioacoustics that answers natural-language questions about animal sounds, with zero-shot species classification.
BiosignalsLanguage model61Opennessp-IgGen
13297Oxford Protein Informatics Group (OPIG) +1 otherNovember 9, 2024antibodyde_novo_designfoundation_model+5Antibody language model that generates paired heavy and light variable domains, with a developability-conditioned variant for manufacturable designs.
Protein68OpennessBC-Design
213—Biochemistry-aware inverse folding model that augments backbone geometry with physicochemical point clouds, reaching ~90% sequence recovery on CATH.
Protein75OpennessscGenePT
3113—Single-cell perturbation prediction model that adds gene-level language embeddings from NCBI, UniProt, and Gene Ontology to scGPT representations.
Single-cell90OpennessMAMMAL
11891KMulti-modal, multi-task biological foundation model trained on 2 billion samples spanning proteins, small molecules, and single-cell gene expression.
ProteinSmall moleculeSingle-cell74OpennessSleepGPT
22——Language model over whole-night sleep stage sequences that corrects automated sleep staging and supplies features for sleep disorder diagnosis.
Biosignals51OpennessBioMed Multi-View
4675.2KMolecular foundation model that late-fuses graph, image, and SMILES encoders into one embedding for molecular property and drug target prediction.
Small molecule77OpennessMedRegA
462913Hong Kong University of Science and Technology +1 otherOctober 24, 2024histologyimage_classificationinstruction_tuning+8Region-aware bilingual medical multimodal LLM that handles image- and region-level vision-language tasks across eight imaging modalities.
PathologyLanguage model65Openness