Academic

Tongji University

A comprehensive research university in Shanghai known for engineering and sustainability, with work in medicine and computational life science.

Location: Shanghai, China
Website
3 models(2 Protein, 1 Language model, 1 Single-cell, 1 RNA)

Models (3)

BioBridge

Tongji University / Fudan University

Released February 4, 2026

2

Connects a frozen protein language model to a general LLM via a cross-modal projector, adding protein reasoning without catastrophic forgetting.

Language modelProtein

OmniNovo

Fudan University / Shanghai AI Laboratory / Tsinghua University / Westlake University / Tongji University / Shanghai Innovation Institute / University of British Columbia / Zhejiang University / Stony Brook University

Released December 13, 2025

De novo peptide sequencing transformer that reads modified and unmodified peptides directly from tandem mass spectra without a reference database.

Protein

CellHermes

Tongji University / Helmholtz Munich

Released November 28, 2025

25430

Single-cell foundation model adapting LLaMA-3.1-8B with LoRA, recasting transcriptomes and protein interaction networks as natural-language Q&A pairs.

Single-cellRNA