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Temple University / Pennsylvania State University / University of Pittsburgh / Weill Cornell Medicine / Cornell University / University of Cape Town
Released September 10, 2026
Phylogeny-informed transformer that detects episodic diversifying selection in codon alignments, amortizing maximum-likelihood dN/dS tests.
Temple University / University of Southern California / University of Washington / Howard Hughes Medical Institute
Released April 3, 2025
Hi-C resolution enhancement model combining a U²-Net with self-attention to recover TAD boundaries and chromatin loops from sparse contact maps.