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bio.rodeo

The authoritative source for evaluating biological foundation models. No hype, just honest analysis.

Hokkaido University

A Japanese national research university in Sapporo, working across the life sciences, agriculture, and engineering with a sustainability emphasis.

Location: Sapporo, Japan

2 models(1 Small molecule, 1 Protein)

Models (2)

National University of Singapore / University of Science and Technology of China / Chinese University of Hong Kong / Hokkaido University

Released February 18, 2025

2524293

3D molecule generation that writes a valid 1D SELFIES string with a pretrained language model, then predicts its conformer with a diffusion module.

Small molecule

Hokkaido University

Released September 19, 2024

——6

Sequence-only pKa prediction for six titratable side chains and both termini, using a frozen protein language model and isoelectric-point features.

Protein

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A Japanese national research university in Sapporo, working across the life sciences, agriculture, and engineering with a sustainability emphasis.

Location: Sapporo, Japan

2 models(1 Small molecule, 1 Protein)

National University of Singapore / University of Science and Technology of China / Chinese University of Hong Kong / Hokkaido University

Released February 18, 2025

2524293

3D molecule generation that writes a valid 1D SELFIES string with a pretrained language model, then predicts its conformer with a diffusion module.

Small molecule

Hokkaido University

Released September 19, 2024

——6

Sequence-only pKa prediction for six titratable side chains and both termini, using a frozen protein language model and isoelectric-point features.

Protein