GrayLab

A generative protein-protein docking model that adapts AlphaFold-Multimer via flow matching, replacing the template module with a docking module.

Generative language model trained on 558 million antibody sequences for infilling-based design of CDR loops and full-length immunoglobulin sequences.

An equivariant graph transformer trained with masked language modeling on protein structure to learn contextual amino acid encodings for sequence design and interface modeling.