Pacific Lutheran University / Anhui University / Hamilton College / Saint Louis University / University of Washington Bothell
Released June 26, 2025
Protein complex model quality assessment via DockQ-guided graph contrastive learning. CASP16 TMscore ranking loss of 0.123 versus 0.138 runner-up.
Hefei Institutes of Physical Science, Chinese Academy of Sciences / Anhui University / Anhui Medical University / University of Science and Technology of China / Hong Kong Baptist University
Released June 19, 2025
Peptide-HLA immunogenicity prediction with a BiLSTM ensemble, inside a pipeline that finds microbial epitopes mimicking tumor neoantigens.
Pacific Lutheran University / Anhui University / Hamilton College / Saint Louis University / University of Washington Bothell
Released November 18, 2024
Protein function prediction from 3D structure and sequence, assigning Gene Ontology terms with an ensemble built around rare long-tail terms.
Institute of Intelligent Machines, Chinese Academy of Sciences / Anhui University / Zhengzhou University
Released August 30, 2023
Nuclei detection and instance segmentation in H&E slide images, where each transformer query carries an anchor circle instead of a bounding box.