All Competitors

Every biological foundation model, evaluated and ranked by the bio.rodeo team

Showing 17 of 7 filtered models

  • Hacettepe UniversityMarch 19, 2026cheminformaticscontrastive_learningdrug_discovery+5

    Multimodal molecular foundation model fusing SELFIES sequences, 2D graphs, text descriptions, and knowledge-graph embeddings via contrastive pretraining for property prediction.

    Small molecule
    55Openness
  • MultiPUFFIN

    NTNU +2 othersMarch 1, 2026drug_discoveryfoundation_modelgraph_neural_network+6

    A multimodal, domain-constrained foundation model that self-supervises on ~500K PubChem molecules to jointly predict nine thermophysical properties of small molecules.

    Small molecule
    10Openness
  • University of CambridgeFebruary 23, 2026drug_discoveryequivariant_neural_networkfoundation_model+5

    A polarizable electrostatic machine-learning interatomic potential extending MACE with long-range induction, trained on 100M OMol25 DFT calculations.

    Small moleculeProtein
    19Openness
  • MolDeBERTa

    4
    Florida International UniversityFebruary 17, 2026cheminformaticsdebertafoundation_model+4

    A DeBERTaV2-based SMILES encoder pretrained on 123M PubChem molecules with physicochemical and structural-similarity objectives for molecular representation learning.

    Small molecule
    25Openness
  • MAMMAL

    11081.8K
    IBM ResearchOctober 28, 2024cell_type_annotationdrug_discoveryfoundation_model+7

    Multi-modal, multi-task biological foundation model trained on 2 billion samples spanning proteins, small molecules, and single-cell gene expression.

    ProteinSmall moleculeSingle-cell
    74Openness
  • IBM ResearchOctober 25, 2024drug_discoveryfoundation_modelgraph_neural_network+5

    Multi-view molecular foundation model that integrates graph, image, and text representations via late fusion for molecular property and target prediction.

    Small molecule
    77Openness
  • MoLFormer-XL

    401549455.3K
    IBM ResearchOctober 3, 2022drug_discoveryfoundation_modellanguage_model+4

    Large-scale chemical language model trained on 1.1 billion SMILES strings using linear attention transformers for molecular property prediction.

    Small molecule
    86Openness