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Contrastive model built on a genomic language model that predicts physical protein-protein interactions across a microbial proteome in linear time.
Protein-protein interaction predictor fusing evolutionary and structural embeddings to screen bacterial and host-pathogen proteomes in minutes.
Sequence-based protein-protein interaction predictor over ProtT5 embeddings that reaches 0.70 AUROC on the leakage-free gold standard benchmark.